Francisella adeliensis: CDH04_07095
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Entry
CDH04_07095 CDS
T06148
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fad
Francisella adeliensis
Pathway
fad03410
Base excision repair
fad03430
Mismatch repair
fad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CDH04_07095 (recJ)
03430 Mismatch repair
CDH04_07095 (recJ)
03440 Homologous recombination
CDH04_07095 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fad03400
]
CDH04_07095 (recJ)
DNA repair and recombination proteins [BR:
fad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CDH04_07095 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CDH04_07095 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CDH04_07095 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AXA34182
UniProt:
A0A2Z4Y0C3
LinkDB
All DBs
Position
complement(1464800..1466548)
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AA seq
582 aa
AA seq
DB search
MIIQRLINQAIYQKLTAQNKDSFLAKIIAARVTDSANLDLVLDGGIKDLSSPFLFKDIDK
AVNRLFVALQNGEVIGLETDHDCDGQTSHAIFYEALTKIFNHPKEKIRSYIGHRMKEGYG
LSEALMTRILTDEVRPSLIITADNGSTDEPRISTLKQNDIDTIVTDHHGIPPEGSPKSAV
AVLNPTQTDCNYPDKFIAGCMVAWLFMAALRRKFIQENIPILTGFALSNLFDLVAIGTVA
DCVSMANSHNNRIVTKLGLKQLEKSDRICWDFFEKEKLSSEYIGFSIAPILNSDGRVADA
LGSVSFLLEQDELKAADIFENLKEQNTNRKEIQKQITADAMRQARVLDKTKSSLCILLEN
GHAGIHGISASRLKDTFGKPIIIFSQTQTDNSLIAGSARSTDEIHIKSMLDEVAKIDPNL
IIKYGGHKGAAGLTIKKDDFEKFYECFESCILKEIKKQDLKLEPFVVYDFELEDSQFNLA
TFSKIESLEPFGREFDKPVFCNDFIVESFRLVGKDKIHAQMVLRIGNTSVKSIWFNATDN
PIVADISIGDNIKACYQLQKEEFLGQVNLGLNIKAIEKNEKS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgattatacaaaggttaattaatcaggctatttatcaaaagcttacagctcagaataaa
gattcttttttagctaaaataatagctgcacgagtaactgattcagctaatttagatttg
gttttagatggtggcattaaagatttgtcatcgccttttttatttaaagatattgataaa
gctgtaaatagactttttgttgctttgcagaatggtgaagtgataggccttgaaacagac
cacgactgcgatgggcaaacatctcatgcaatattttacgaggctttaactaaaatattc
aatcaccctaaagaaaaaattcgctcatatattgggcatagaatgaaagaggggtatggg
ctttcagaagctcttatgactaggattttgacagatgaagttcgaccatcgctgattata
acagcagataatggttcgacagatgaacctagaatatcaacgcttaagcaaaatgatata
gatactatagttacagatcatcatggcataccaccagaaggttcaccaaagagtgcagtt
gctgtacttaatccaactcaaacagattgtaactatcctgataagtttatagcagggtgt
atggttgcttggctttttatggcagctttacgcagaaaatttattcaagagaatatacct
attttaacaggttttgctttgagtaatctttttgatttagttgctattggtacagttgca
gactgtgtgagtatggcaaatagccataataatcgcatagtaacaaagcttggtctaaaa
caactagaaaaaagtgatcgtatttgttgggatttttttgagaaagagaagttatcttct
gagtatataggctttagtattgcaccgattttaaacagtgatggtagagtggctgatgct
ttaggttcggtaagttttttactagaacaagatgaattaaaagcagctgatatatttgaa
aatcttaaagagcaaaacacaaatcgtaaagagatacaaaaacaaataacagcagatgca
atgagacaagctcgagtgcttgataaaactaaaagctcactgtgtatactgcttgaaaat
ggtcatgctggaatacatggtatatctgcaagtaggctaaaggatacttttggtaagcct
ataattatattctcacaaacacaaactgataattcattaatagcaggttcagctcgtagt
accgatgagattcatataaaaagcatgctagatgaagttgctaaaattgatcctaatttg
ataataaagtatggtggacataaaggagctgctggattaactatcaaaaaagatgatttt
gaaaagttttatgaatgttttgaatcttgcatactaaaagaaataaaaaaacaggatcta
aaattagagccatttgtagtgtatgattttgaacttgaagatagccagtttaatttagca
acattttccaaaatagaatcactagaaccatttggtagagagtttgataaaccagtgttt
tgtaatgattttatagtagagagttttaggcttgtaggtaaagataaaatccatgctcaa
atggttttacggattggtaatacgtctgttaaatctatatggtttaatgctacggataac
ccgattgttgctgacataagtatcggtgataatatcaaagcgtgttatcagcttcaaaaa
gaagagtttcttggacaagttaatttgggcttgaacataaaggctatagaaaaaaatgaa
aaatcataa
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