Fibrella aestuarina: FAES_0486
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Entry
FAES_0486 CDS
T02429
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
fae
Fibrella aestuarina
Pathway
fae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FAES_0486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fae03400
]
FAES_0486
Enzymes [BR:
fae01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FAES_0486
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FAES_0486
DNA repair and recombination proteins [BR:
fae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FAES_0486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
NFACT_N
DNA_ligase_ZBD
Zn_ribbon_NUD
Auto_anti-p27
DUF2116
zf_UBZ
Motif
Other DBs
NCBI-ProteinID:
CCG98497
UniProt:
I0K2Z4
LinkDB
All DBs
Position
626870..627688
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AA seq
272 aa
AA seq
DB search
MPELPEVEIRRMYLEATSLAQPIDSITVEDKKLLTTEFDTLYEKLEGRQFTHTRRVGKNL
FIYTDDPRVILRMHFGMTGDLEYYHNSVDRPRHARIVFYFTNGFCLGFICPRKFERIGLV
NDVDEFLRLKKIAPDALSIELGTLRDKLKKRRSPIKPVLLDQSTTAGLGNWIVDEVLFQA
KVHPSAVSAELSEAEVEAIHEAIQLVLKTAIAKEAVYKDFPRSFLIHVREWDDSPYDDVE
AHKVCPRCGTPIERTEVGGRTTFFCPNEQVLG
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactacccgaagtcgagatccggcggatgtacctggaggccacctcgctcgcc
caacccatcgactccatcactgtcgaagacaagaaactacttaccaccgaattcgatacg
ctttacgaaaaactcgaaggtcgccagttcacccatacacgccgggttggtaaaaacctg
ttcatctacaccgacgacccccgcgtgattttgcggatgcatttcggcatgaccggcgac
ttggagtattaccacaactccgtcgaccggccgcggcatgcgcgcatcgtcttttacttt
actaacggcttttgtctaggcttcatctgcccccgcaaatttgagcggatcgggctggtc
aacgacgtcgatgaatttctgcggttgaagaagattgcgcccgatgcgctgtctattgag
ctgggtacgttgcgggacaagctgaaaaagcgccgatcgcccatcaaacccgtgctgctc
gaccagtcgacgaccgccgggctgggaaactggattgtcgatgaagtcttgtttcaggcc
aaggttcacccatcggcggtcagcgctgagttgtcggaggccgaagtcgaagcaattcat
gaggccattcaactcgtgctgaaaacggccatcgcgaaggaagcggtctacaaagatttc
ccgcgttcgtttctgatccacgtgcgcgagtgggacgattcgccctacgacgacgtggaa
gcgcacaaggtttgcccgcgttgcggtactcccatcgaacgaaccgaagtgggtggccgt
acgacctttttctgccctaacgaacaggtacttgggtaa
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