Fibrella aestuarina: FAES_0936
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Entry
FAES_0936 CDS
T02429
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fae
Fibrella aestuarina
Pathway
fae03030
DNA replication
fae03430
Mismatch repair
fae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAES_0936
03430 Mismatch repair
FAES_0936
03440 Homologous recombination
FAES_0936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fae03032
]
FAES_0936
03400 DNA repair and recombination proteins [BR:
fae03400
]
FAES_0936
Enzymes [BR:
fae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FAES_0936
DNA replication proteins [BR:
fae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FAES_0936
DNA repair and recombination proteins [BR:
fae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FAES_0936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CCG98947
UniProt:
I0K494
LinkDB
All DBs
Position
complement(1169367..1170218)
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AA seq
283 aa
AA seq
DB search
MNHNLKLKKPLAVFDLETTGVNTAKDRIVEVCVAKAMPSGELVVKTYRVNPGVPIPLETS
LIHGIYDEDVKDAPSFKSIARTLAQFLEGCDLAGFNSNRFDIPLLVEEFLRANVDFDMKN
RRMVDVQRIYHLMEPRNLSAAYRHFCGKELVGAHGAEADTLATFEVLDTIVQKHAGQTIR
DEGRKRDFVIDNDVETLDAIGRNNNVDLAGRMVFNDKGEEVINFGKHAGKPVLDVLKNEP
SFYDWVQKGEFSLDTKRRLTEIRLRMFTGALNGTHSRGPSREK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacaatctcaaactgaaaaaacccttagccgttttcgacctcgaaacaacgggc
gtcaatacggccaaagaccggattgtggaggtatgcgtggccaaagcgatgccgtcgggt
gagttggtcgtgaaaacgtaccgcgtcaaccccggcgtaccaatcccgctcgaaaccagc
ctgatccacggcatttacgacgaagacgtcaaagacgctccctcattcaagagcatcgcc
cggacactggctcaattcctggaaggctgcgacctggcggggttcaactccaaccggttc
gacattccgctgctggtggaagagtttctgcgcgccaacgtcgatttcgacatgaaaaat
cgccgtatggtcgacgtgcagcgcatttatcacctgatggagccccgcaacctcagcgcc
gcttaccggcatttctgcgggaaagaactggtgggtgcgcacggggccgaagctgatacg
ctggctacgtttgaggtgctggatacgattgtgcaaaaacatgctggccagactatccgc
gacgaaggccgtaagcgcgacttcgtgatcgacaacgacgtggagacgctcgatgccatt
ggccgcaacaacaacgtggatctggcgggccggatggtgtttaacgacaagggcgaagaa
gtcatcaattttggcaaacatgccgggaagccggtgctcgacgtcctgaaaaacgaaccg
tccttttacgattgggtgcagaagggcgagttttcgctcgacaccaaacgccgcctgacc
gaaatccgccttcgcatgttcaccggcgctttgaacgggacgcattcacggggcccttcg
cgggaaaaatag
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