Fibrella aestuarina: FAES_1931
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Entry
FAES_1931 CDS
T02429
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fae
Fibrella aestuarina
Brite
KEGG Orthology (KO) [BR:
fae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fae03032
]
FAES_1931
03400 DNA repair and recombination proteins [BR:
fae03400
]
FAES_1931
Enzymes [BR:
fae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FAES_1931
DNA replication proteins [BR:
fae03032
]
Prokaryotic type
DNA Topoisomerases
FAES_1931
DNA repair and recombination proteins [BR:
fae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FAES_1931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
CCG99940
UniProt:
I0K737
LinkDB
All DBs
Position
complement(2379121..2380182)
Genome browser
AA seq
353 aa
AA seq
DB search
MNPSTGQSDAVQLARAAKLVYVNDTMPGIARRQNGNRYEYLDPKGSPIDDDATLERIRRL
ALPPAYQHVWICPRPNGHLQATGIDAKGRKQYRYHANWNAARSETKFHRMIAFGEKLPLL
RKRLQQDLKQRTLSKEKVIAVALSVMEQTLIRVGNAAYEKEYGSYGLTTLKNRHVKAQGD
ALRFSFKGKKGIYHDITLRDRRLTRLVKACRELPGKELFQYLDEAGERHSIDSGMVNTYL
QETMGDEFSAKDFRTWAGTTNALRLLIELEPCASDKEAKKNVNTVLDEVAHRLGNTRTVC
RKHYVHPQLLEAYECQDLNPYIKRRNRFKQSSPSGLDGVEKMLLAFLKEQVKP
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaacccatcaacaggccaatccgatgccgtgcaactggccagagccgccaagctggtt
tacgtaaacgataccatgccgggcattgcgcggcggcaaaacggcaatcggtacgaatac
ctcgaccccaaaggctcgcctatcgacgacgacgccacgctggaacgaatccggcggctg
gccttgccgcccgcctaccagcacgtctggatttgcccccggccgaacggccacttgcag
gccaccggcatcgacgccaaagggcgaaaacagtaccgctaccatgccaactggaacgcc
gcccgcagcgagaccaaatttcaccggatgattgccttcggggagaagctgccgctgctg
cgaaaacgcctgcaacaggatcttaaacagcggacactgtctaaagagaaagtaattgcg
gtggccctgagcgtgatggaacaaaccctgatccgggtcgggaatgccgcctatgaaaaa
gagtatggctcgtatggcctgacgaccctcaagaaccggcacgtgaaagcccagggcgac
gcgctacgctttagctttaaaggcaaaaaaggcatctatcacgacatcaccctgcgcgac
cgtcgcctcacccgcctggtgaaagcctgccgcgaactgcctgggaaagaactgtttcaa
tacctcgacgaagccggggagcgccacagcatcgactcgggcatggtcaacacgtacctg
caggagacgatgggcgatgagttttcggccaaagattttcgcacctgggcggggacaacc
aacgccctgcgcctgctgatcgaactggaaccctgtgcgtcggataaagaagcgaaaaag
aacgtcaatacggttctcgatgaggtggcccaccgcctgggtaatacccgcaccgtctgc
cgaaaacattacgtgcatccgcagttgctggaggcctatgaatgccaggacctgaacccg
tacatcaaacgccgaaaccgcttcaaacaaagcagcccatctggcctcgatggcgttgaa
aaaatgttgctggcctttctaaaagaacaggtgaaaccgtaa
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