Fibrella aestuarina: FAES_2317
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Entry
FAES_2317 CDS
T02429
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fae
Fibrella aestuarina
Pathway
fae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FAES_2317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fae03019
]
FAES_2317
03016 Transfer RNA biogenesis [BR:
fae03016
]
FAES_2317
Enzymes [BR:
fae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FAES_2317
Messenger RNA biogenesis [BR:
fae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FAES_2317
Transfer RNA biogenesis [BR:
fae03016
]
Prokaryotic type
tRNA degradation factors
FAES_2317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
KH_2
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
CCH00326
UniProt:
I0K873
LinkDB
All DBs
Position
2861140..2863275
Genome browser
AA seq
711 aa
AA seq
DB search
MFQVTTQTVALPDGREITIETGKLARQADGAVVVRLGDTMLLATVVASKEAREGIDFLPL
SVDYQEKFASAGRIPGSFQRREGRLSDYEILISRLVDRALRPTFPENYHADVQVMITMIS
ADPEVQPDQLAALAASSALAVSDIPFGGPISEVRVAKINGEYKINPLTSELQNATLDLIV
AANERDINMVEGELDEAQENEVVEALKVAHDAIKAQIAAQKELEAKVGKTEKREYNHETH
DEELRAAVRAFCYDKIYEVAKKGQASKKARSEGFKAVRDEYMASLPEGAEVNESLIKTYF
HDLVWEASRNLVLNERYRLDSRKLDEIRPIQCEVDYLPRAHGSAIFTRGETQSMTTVTLG
TKLDEQIVDQPLTQGYNKFMLHYNFPGFSTGEVKPNRGASRREVGHGNLAHRALKGMLPE
GQDNPYTIRIVSDILESNGSSSMATVCAGTLALMDAGIKIKAPIAGIAMGLITDEATGKY
AVLSDILGDEDHLGDMDFKVTGSEKGITAVQMDMKVNGLSYEILTEALMQARAGRLHILG
EMKKALDAVKPDLKSFAPRAYVIKIAQDQIGAVIGPGGKVVQEIQRESGATVNIEEREGA
GFVSIFATNKESMDKAVGRVKGITATAEVGEIYDGKVKTIQPFGAFVEFLPGKDGLLHIS
EVKWERLETMDGVFKVGDEVRVKLVEIDKKTGKYRLSRKALLPRPENNTKA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagtcaccacacaaacggtcgccctccccgatggacgggagatcacgattgaa
accggtaagctggcccgtcaggccgacggagccgttgtcgttcgattgggcgatacgatg
ttgttagccaccgtcgtggccagtaaggaagcccgcgaagggatcgacttcctgccgctg
tcggtcgattaccaggaaaaatttgcgtctgccggtcggattcccggtagcttccagcgc
cgcgaaggtcggctgtcggattacgaaatcctgatcagccgcctcgttgaccgggcgctg
cgccccaccttccccgaaaattaccacgccgacgtgcaggtgatgatcaccatgatctcg
gccgaccccgaagtacagcccgatcagctggccgccttggctgcttcatcggccctggcc
gtatccgacattccgtttggtggcccgatttcggaagtacgcgttgccaaaatcaacggc
gaatacaaaatcaatcccttgacgtctgagttgcagaacgccaccctcgacctgattgtc
gctgccaacgagcgcgacatcaacatggtggaaggcgaactggacgaggcgcaggaaaat
gaggtggttgaagcgctgaaagtggctcacgatgccatcaaagcgcagattgccgcccag
aaagaactcgaggcaaaggttggcaaaaccgaaaagcgcgagtacaaccacgaaacgcac
gatgaggagttgcgcgctgccgttcgggcgttctgttacgacaagatttacgaggtagcg
aagaaagggcaggccagcaagaaggcccgctcggaaggcttcaaagccgttcgcgacgaa
tatatggcatcgctgcctgaaggggccgaggttaacgaaagcctgatcaagacgtatttc
cacgacttggtttgggaagcctcgcgtaacctggtactgaacgagcgctaccgcctcgac
agccgcaaactcgacgagatccggcccattcagtgcgaagtcgattacctgccccgtgcg
cacggttcagccatcttcacccgtggcgagacccagtcgatgaccaccgtaacgctcggc
actaagctggacgagcagatcgttgatcagccgctgacgcagggctacaacaaattcatg
ttgcactacaacttccctggcttctcaacgggcgaagtaaaacccaaccggggtgccagc
cgccgcgaagttggccacggtaacctggcccaccgcgccctcaaaggcatgctgcccgaa
ggtcaggataacccgtacaccatccgtatcgtatccgacattctggagtcgaacggatcg
tcgtcgatggcgacggtgtgtgccggtacgttggcgctgatggacgccggtatcaaaatc
aaagcgcccattgccgggatcgcgatggggttgatcaccgacgaagccaccggtaaatac
gccgtactgtcagacattctgggtgatgaagatcacctgggtgatatggacttcaaagtg
acgggttcggagaaaggcatcaccgcggttcagatggacatgaaggtgaacggcctgtcg
tacgaaatcctgaccgaagcactgatgcaggcccgcgctggtcggctgcacattctgggc
gagatgaagaaagcgctcgacgccgtgaagcctgacctgaaatcgtttgcgccgcgtgcc
tacgtgatcaagatcgcgcaggatcagatcggtgccgtgatcgggcccggtggtaaagtg
gtacaggagattcagcgtgaatctggggccactgtcaacatcgaagagcgggaaggcgct
ggtttcgtcagcattttcgcgaccaataaagaaagcatggacaaagccgttggccgcgtt
aaaggcatcacggcaacggctgaagtaggcgaaatctacgacggtaaggtgaaaaccatc
cagccgtttggggccttcgttgagttcctgccgggtaaagacgggcttctccacatttca
gaggttaaatgggagcgcctggaaactatggacggcgtctttaaagtaggggatgaggtt
cgggtaaaattggttgagattgacaagaaaacgggtaaataccgtttatctcgtaaagct
ctgctaccgcgcccggagaacaatacgaaagcctga
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