Fibrella aestuarina: FAES_2853
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Entry
FAES_2853 CDS
T02429
Symbol
rho
Name
(GenBank) Transcription termination factor rho
KO
K03628
transcription termination factor Rho
Organism
fae
Fibrella aestuarina
Pathway
fae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FAES_2853 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fae03021
]
FAES_2853 (rho)
03019 Messenger RNA biogenesis [BR:
fae03019
]
FAES_2853 (rho)
Transcription machinery [BR:
fae03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FAES_2853 (rho)
Messenger RNA biogenesis [BR:
fae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FAES_2853 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
NACHT
AAA_25
S1CSD-TOTE-2
ATPase_2
AAA
Motif
Other DBs
NCBI-ProteinID:
CCH00862
UniProt:
I0K9Q9
LinkDB
All DBs
Position
3533894..3536329
Genome browser
AA seq
811 aa
AA seq
DB search
MYTSSELNAKLLAELRGLASQFGIEDAAKHTKKELVTKILDNQTQPPAATPTDASAAPAP
KRATSRSRKPQPDAGAPTDALPAVEADPQAPAAVAAPADTADATPARPTRQRAKRTTDVP
AEAPQSVAAEPVAPVADAVAANVPTDNVPAVAEAPAEANPATDEQAGLRREPRQRLDAPR
PADARQQRTGDNRFNENRPNRNDQNRNNDRFRDNNRENPRDAGNGMNRQPRPDNRGGNDL
NRYSGNNRDNSGYNRPDNGGRGNDMGRSDRPQNPSQNSSNRPDRFNNQPPIPRNGQGNDA
SRPDQNRNMTRRELRENYRSDVNRQDPNRQQGGGQPTNPTNQPFQNRRQVRDESAFNYQG
EPEEEFLTPTVVSDQTPGLTNVPPAPAAEVMPAVEADPQAPEPTDDGQGENRQQAAQPSR
EQTEYAARIRRQYNQYVREFDGIIENEGVLEIMPDGSYGFMRSADYNYLASPDDIYVSPS
QIKLFGLKTGDTIRGTIRPPKEGEKYFALLKVITVNGKTTEEIRDRIPFEYLTPLFPDEQ
LKLSHRPDQYSTRVLDLFAPIGKGQRGMIVAQPKTGKTVLLKEIANAITKNHPEVYLIIL
LIDERPEEVTDMARSVNAEVISSTFDEQADRHVKVSSMVLEKAKRMVECGHDVVILLDSI
TRLARAYNTVVPSSGKILSGGVDANALHKPKRFFGAARNVENGGSLTIIATALIDTGSKM
DEVIFEEFKGTGNMELQLDRRLANKRVYPSIDVMTSGTRKEDLLLDRETLQRVWILRKHM
ADMNPMETMDFLLDRMRGTRSNEEFLISMNR
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgtatacctcaagcgaattgaatgctaagctccttgcagagctgcgcggccttgccagt
cagtttggtattgaagacgccgccaaacacactaaaaaagaattagttacgaaaattttg
gataaccaaacccaaccccccgcggctacacctaccgatgcttccgccgcgccagcgcct
aagcgcgctacctcccgtagccgtaaaccccaacccgacgccggtgcccccaccgacgcc
ctgcccgccgttgaggctgatccgcaggcacccgcggcagtagctgcgccggccgacacc
gccgacgctacccccgcccggcctacgcgccaacgtgccaaacgcaccaccgacgtacct
gccgaggcgcctcagtcggttgccgccgaaccagtagccccggtagccgacgcagtggcg
gccaacgtacctaccgacaacgtacctgcggttgcagaagcccccgccgaagcaaacccg
gctaccgacgagcaggctggcctgcggcgcgagccccggcagcgcctcgatgccccccgc
ccggccgatgcccgccaacaacgcacgggcgataaccggttcaacgaaaatcgccctaac
cgcaatgaccagaatcggaacaacgaccggttccgcgacaacaatcgcgagaacccccgc
gacgctggcaatgggatgaaccggcagccgcgccccgacaaccgcggtggcaacgaccta
aaccggtattcgggtaataaccgtgataacagtggctataatcggcccgataacggcgga
cgtggcaatgatatgggccgtagcgatcgcccgcagaatccgtcacaaaactcgtcgaac
cggccggatcgttttaacaaccagccaccaataccgcgcaatgggcagggcaacgacgcc
agtcggccggatcagaaccggaacatgacccgccgcgaactgcgcgaaaactaccgcagc
gatgtaaaccgccaggatccgaatcggcagcagggcggtggccaaccgactaacccaacg
aatcagccgtttcagaaccgccgtcaggtacgtgacgaatcggcgttcaattaccagggt
gagcccgaggaggagtttctgacgccaaccgtggtgtcggaccaaacccccggcctgacc
aacgtacccccggctccggccgccgaggtaatgcccgctgtcgaagccgatccgcaggcc
cccgaaccgaccgacgatgggcagggtgagaaccggcagcaggccgcgcagcccagtcgc
gaacaaaccgaatatgccgcccgcatccgccgccaatacaaccagtatgtgcgcgaattc
gatggtatcatcgagaacgagggcgtactggaaatcatgcccgacggtagctacggcttc
atgcgttcggccgattataactacctcgccagccccgacgatatttacgtgtcgccgtcg
cagatcaagctgttcggcctgaaaacgggcgataccatccggggtaccatccggccaccc
aaagaaggggagaagtatttcgccctgctgaaggtgattaccgtcaatggcaaaacgacc
gaggaaatccgcgaccggattccgtttgagtaccttaccccgctcttccccgacgagcaa
ctgaaactcagccaccggcccgaccaatattcgacccgcgtgctcgacctgtttgcgccg
atcggtaaagggcagcgcggtatgatcgtggcccagcccaaaacgggtaaaaccgtgctg
ctgaaagaaatcgccaacgccattaccaaaaaccatcctgaggtatacctgatcattctg
ctgatcgacgaacgccccgaggaggtaaccgacatggcccgcagcgtgaacgccgaggtt
atttcgtcgaccttcgacgaacaggccgaccgccacgtgaaggtgtcgagcatggtgctg
gaaaaagcgaaacggatggtcgagtgtggccacgacgtggtgatcctgctcgactcgatt
acgcggctggcgcgggcctacaacacggtggtgccgtcgtcgggtaagattctatcgggt
ggtgtcgatgccaacgcgctgcacaaacccaagcggttcttcggggccgcccggaacgtg
gaaaacggtggttcgctcaccatcatcgctacggccctgatcgacaccggctcaaaaatg
gacgaggtgatttttgaagaattcaaaggcaccggcaacatggaactccaactggaccgc
cgtctggccaacaagcgcgtatacccatccatcgatgtaatgacgtcgggcacgcggaaa
gaagacctgctgcttgaccgcgaaacgctgcaacgcgtctggattctgcgcaaacacatg
gccgacatgaaccccatggaaacgatggatttcctgctcgaccgcatgcgcggcacccgc
agcaacgaagaattcctgatctcgatgaaccgctag
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