Fibrella aestuarina: FAES_3970
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Entry
FAES_3970 CDS
T02429
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
fae
Fibrella aestuarina
Pathway
fae03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FAES_3970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fae03400
]
FAES_3970
DNA repair and recombination proteins [BR:
fae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FAES_3970
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FAES_3970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
nSTAND1
AAA_21
DnaJ_CXXCXGXG
SMC_N
AAA_29
AAA_16
Anti-TRAP
DUF4350
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
CCH01971
UniProt:
I0KCW8
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Position
complement(4908923..4911580)
Genome browser
AA seq
885 aa
AA seq
DB search
MARRTNANDQDDKAASGFVRVRGAREHNLKNIDVLIPRNQLVVFSGVSGSGKSSLAFGTL
YAEAQRRYFESVSPYARRLIDQVGVPDVDAIDGLPPAVALQQQRGTPNARSTVGSLTTLS
SLVRMLYSRVGTYPARQTMLYAEDFSFNTPQGACPRCQGMGRVHTMTEESMVPDPSLTIR
QRAIAAWPTAWGGQNLRDILVSLGYDIDIPWKDLPKKDRQWILFTDEQPTVPVYAGLTPT
ETRQAQRLKMEPSYQGTFSSARRNLEHTLAHTDSAAMRKRVLQFMISSPCPVCQGKRLKP
EALSVTFAGYDIADLSHLSIAQLADVITPAANGEFAADRNSATSLVSRQAAKAALDRRLR
AGGSAHKGAPDVRRTDDLSPEKRIAAERLCGDLLDRLTTLIELGLGYLSLDRSTPTCSSG
ELQRLRLATQLSSQLFGVIYVLDEPTAGLHPADGHALFDALDRLKASGNSLFVVEHDVEL
MRRADWLVDVGPEAGSAGGRILYSGEPQGLRQVSESRTRPYLFEETARPSSPNRSPQGWL
RLEGVRRNNLQGVTVSFPLGCFTAVTGVSGSGKSSLVSQSLLDLVAAHLGMRREEAEEDT
LENTPAEKTIGRLGGAIEAIQRLIEVDQKPIGRTPRSNLATYTGLFDQVRKLFAATPEAR
RRHFDAGRFSFNVAKGRCPTCEGAGQVSIELLFMPSVYAPCPTCHGKRYNEKTLAINWNG
KSIADVLNMTVDEACLFFAQEALVLRSLDTLRDIGLGYLKLGQSATELSGGEAQRIKLST
ELQRTQRGTTLYVLDEPTTGLHPRDVDRLLVQLNRLVDAGNTVIVVEHDMRTVAQCDWVI
DVGPGAGNHGGTIVAAGTPAELATCQASRTAPFLANSLKPSRSPL
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggctcgacgaacaaacgccaacgaccaggacgataaagccgcatccggatttgtccgc
gtgcggggggctcgtgagcacaacctcaaaaatatcgacgtcttaataccacgcaatcag
ctggtggttttcagcggtgtttccggctcgggcaaatcgtccctggccttcggtaccctc
tatgccgaagcacagcgacggtattttgaatcggtttccccctatgccagacggctcatc
gatcaggtcggcgtgccggatgtcgacgccattgacggcctgccccccgctgtcgccctt
cagcagcaacgcggcacgcccaatgcccgctcgacggtcggtagtctgacgaccctgtcg
agcctggtgcgcatgctctactcgcgcgtgggtacctaccccgcccgccagacgatgctg
tatgcggaggatttttccttcaataccccccagggggcttgtccccgctgccagggcatg
ggccgcgtacataccatgaccgaagagtcgatggttccggatccgtcgctgaccatccgc
cagcgggccattgccgcttggcccacggcctggggcggtcagaacctgcgcgacatttta
gtctccctgggctacgacatcgacataccctggaaagacctgcccaagaaggaccgacag
tggattctctttacggacgagcagcctacagttcccgtctatgcgggcctcaccccaacc
gaaacgcgtcaggctcagcgactgaagatggaacccagctatcagggaaccttcagcagc
gcccgacgaaacctggagcacacgctggcccataccgacagtgccgccatgcgcaaacgc
gtgttgcagtttatgatcagtagtccctgcccggtatgccagggcaagcgcttaaagcca
gaggccctttccgttaccttcgccggctatgacatcgccgatctctcgcatctctccata
gcccaactggcagacgttatcaccccggccgcgaatggcgagtttgccgccgacaggaat
tcggcaacgtcgttggtgagtcgccaggcggcaaaagccgcgctggatcggcgcctgcgg
gcaggtggctcagcgcacaagggcgccccggatgtgcgccgtacggatgatctctcgccg
gaaaagcgcatcgctgccgagcgcctgtgcggtgatctgctggatcgcctgacaacgctc
attgagctgggcctgggttacctgtcgcttgaccgtagcacgcctacctgctcatccggt
gagttgcagcgactgcggctggccactcaactctcctcccagctctttggggtcatctat
gtgctggatgagccgacagccgggctgcacccggccgatggccatgcgctcttcgacgcc
ctggacaggctcaaagcgtcgggtaactcgcttttcgtggtcgaacatgacgttgagctg
atgcgccgtgccgattggctggttgatgttggccctgaagcgggcagcgcgggcgggcgc
attctctacagtggcgaaccacaaggcctcaggcaggtcagcgagtcccgcacccggccc
tacttgtttgaggaaacagcccgaccctcgtctcccaaccgttcccctcaaggctggcta
cgtctggaaggagtccgacgaaataatctccagggggtgactgtttcgtttccgctgggt
tgctttaccgccgtaaccggtgtctcggggtcgggtaaatccagcctggtgagccagtct
ctgctggatctggtagcagcgcatctgggtatgagacgggaagaagccgaggaagatacg
ctggaaaatacccccgccgaaaaaaccatcggtcgattggggggcgctatcgaggccata
cagcgactgattgaggtggatcaaaaaccaatcggacgaaccccgcgctccaacctggcc
acctataccgggctttttgatcaggtccgcaaactctttgccgccacgccggaggcccgt
aggcggcacttcgatgccgggcgtttttccttcaacgtcgccaaagggcggtgccctacc
tgtgagggagcaggccaggtcagcatcgagctgctgttcatgccgagcgtgtatgccccc
tgtccgacctgtcatggcaaacgctacaacgagaagacgctggccattaactggaacggc
aaatccattgcggatgtgctgaacatgacggttgacgaagcctgcctgttctttgcccag
gaagcgttggtgttgcggtccctagacacgctacgggatattggcctgggttatctcaaa
ctggggcaaagtgcgaccgagctttccggcggggaggcccagcgcatcaagctctccacc
gaactgcaacgaacccaacggggcaccaccctctacgtgttggacgagccgaccaccggc
ctgcatccgcgggatgtcgaccgtcttttggttcagctgaaccgcctggttgatgcgggc
aataccgttatcgtcgtcgaacatgatatgcgtacggtcgcccagtgtgattgggtgatc
gatgtgggtcccggagcggggaatcacggcggcacgatcgttgcggcaggcactcccgcc
gagctcgccacgtgtcaggcaagtcgcacggctccttttttggcgaatagtctgaaacca
tcacgaagtcccctctaa
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