Fibrella aestuarina: FAES_4131
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Entry
FAES_4131 CDS
T02429
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fae
Fibrella aestuarina
Pathway
fae03030
DNA replication
fae03430
Mismatch repair
fae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAES_4131
03430 Mismatch repair
FAES_4131
03440 Homologous recombination
FAES_4131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fae03032
]
FAES_4131
03400 DNA repair and recombination proteins [BR:
fae03400
]
FAES_4131
Enzymes [BR:
fae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FAES_4131
DNA replication proteins [BR:
fae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FAES_4131
DNA repair and recombination proteins [BR:
fae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FAES_4131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
OB_MCM10
DUF413
LysM1_NFP_LYK
RE_MjaI
Motif
Other DBs
NCBI-ProteinID:
CCH02131
UniProt:
I0KDC8
LinkDB
All DBs
Position
complement(5091966..5095586)
Genome browser
AA seq
1206 aa
AA seq
DB search
MQFSHLHCHTQYSLLDGQADIKKLIKKAKADNMPAVAITDHGNMFGVFEFVAESAKQGIK
PIVGCEFYVVDDHTRKQFTKEQKDIRYHQLLLAKNPTGYKNLAKLCSLGYMEGLYGKYPR
ITKELIDKYKEGLIATTCCIGAIVPKTILKKGEEAGETEFKWWLDRFGEDYYVELQRHEI
PDQIKANEVLVKLARKYNVKIIASNDSHYVDRDDWVAHDILLCVNTGEKQSTPSMKEFND
EEAMPKNTRFAFFSDQFYFKNTQEMSTLFHDLPEAIDNTNEIVDKVETLKLKRDILLPNF
PIPQEFQQHTDDVLNQWEYLKHLTYEGAKKRYVDISPEVQERLDFELFTIRTMGFAGYFL
IVADFIKAGRDLGVMVGPGRGSAAGSAVAYCIGITNIDPIKYNLLFERFLNPDRKSMPDI
DTDFDDEGRQKVIDYVVDKYGKQQVAAIVTYGTMAAKSAIKDVSRVMDLPLNDANALAKL
VPDKPTYNMTLKRIFEDPIDGPGGLSNLITPDEVENVRRMRALESGDQNVGRVMKLIDTE
KVQNVLQQARRLEGTVRNTGVHAAGIIIAPDDLSNIVPVSTSKDTNLIITQYEGKVIEDA
GVIKMDFLGLRNLTIIKECLRLIKQNYGREIDIDSIPLDDPKPYELFQRGETNAIFQFES
DGMKKYMKDLKPDRFEDLIAMNALYRPGPIQYIPNFINRKHGREEVKYDMPEMEEYLADT
YGITVYQEQLMLLSQKLGNFTKGDADVLRKAMGKKDRATLDKMKGKFMEGCAANKLPVKT
CEKVWTDWEAFASYAFNKSHSTCYAFVAYQTAWLKAHYRSEYMAAVLTSCLGNIEKITFF
LEECKNINIPVLGPDVNESERVFGVNKKGEIRFGLGGIKGSGDAAVENIIAERTQNGPYQ
DMFDFITRVNLRTVNKKTIESLAYAGAFDALDPDIHRAQYFETAPGDTSTFIEKIIRYAN
NHHAEKSASQQSLFGGGAGNDVAMPRPKPPVVTPWNQIEKLKFEKDVVGFYITGHPLDEF
TVELEGFCNCTLDKVYETNAPELRIGGIVSSVQTRIAKNGNPFMIFKLEDYQGSMEMTLF
GEDYARMAQYVEPGLFLHVTGKTQNRWNSDQLEFKPTNIRYLSDIREKMCKELAITINLA
FLSEELIGVINDLVKAHPGTCTLSMKVKDPDEPVEVNLLSRQYRVFPDNRLLNALRSMDG
VHCKVA
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgcagttttcgcaccttcattgccatacccaatactcgctgctcgatgggcaggccgat
attaagaagctgattaagaaggctaaggccgataatatgcccgctgtggcgattaccgac
cacggcaatatgttcggcgtgtttgagttcgtggccgagtcggccaagcagggcatcaaa
ccgattgttggctgtgagttttacgtggttgatgaccacacgcgcaagcagtttaccaaa
gagcagaaagatattcgctaccatcagctgctgctggccaaaaatccgactggctacaaa
aacttggcgaagctgtgctcgctcggctacatggaaggcttgtatggtaaatacccgcgt
attaccaaagaactgatcgataagtacaaggagggcctgatcgctactacttgctgcatc
ggggctatcgtgcccaaaacgattctgaaaaaaggcgaagaagcaggtgagaccgagttt
aagtggtggctcgaccgcttcggggaagactattacgtggaactgcaacgccacgagatt
cccgatcagatcaaggccaacgaggtgctggtcaagctggcccggaaatacaacgtcaag
atcatcgcttccaacgactcgcactacgtcgaccgcgacgactgggttgcccacgatatt
ctgctgtgcgtcaacacgggcgaaaagcagagcacaccgtcgatgaaggaattcaacgac
gaggaggcgatgcccaaaaacacgcggttcgcgttcttctccgatcagttctatttcaag
aacacgcaggagatgagcacgctcttccacgacctgcccgaggccatcgacaatactaac
gagatcgtcgacaaagtggagacgctgaagctgaagcgcgatattctgctgcccaacttc
ccgattccgcaggagtttcagcaacataccgacgacgtcctcaatcagtgggaatacctc
aagcacctgacctacgaaggggccaaaaaacggtacgtcgatatctcgcccgaagtgcag
gaacgactcgattttgagttgtttaccatccggacgatgggttttgcgggctatttcctc
atcgtggccgacttcatcaaggccgggcgcgacctaggcgtgatggtggggccgggccgg
ggctcggcggcgggctcggcggtggcttactgcatcggcatcaccaatatcgaccccatt
aagtacaacctgctgtttgaacgcttcctcaaccccgaccggaagtcgatgcccgatatc
gataccgattttgatgatgaaggtcggcagaaggtgatcgattatgtagtcgacaaatac
ggaaagcagcaggtggcggccattgttacctacggtacgatggcggccaaatcggcgatt
aaagacgtgtcgcgggtgatggatttgcccctcaacgacgccaacgccctcgccaaactg
gtgcccgacaaaccaacctacaacatgaccctgaagcggattttcgaagatccgatcgac
gggccgggtgggctgagtaacctcattacacccgatgaagtcgagaacgtacggcggatg
cgggcgctcgagtcgggtgatcagaacgtggggcgggtcatgaaactgatcgacaccgag
aaggtgcagaacgtgttgcagcaggcgcggcggctggaaggcaccgtgcgcaacacgggc
gttcacgcggcggggatcatcattgcccccgacgacctgagcaacatcgtgccggtgtcg
acgtcgaaagataccaacctgattatcacccagtacgagggtaaggtaatcgaagacgcg
ggcgtgattaagatggactttctggggttgcgcaacctcaccatcatcaaggaatgcctg
cgcttgatcaagcagaactacggccgggagatcgacatcgacagtattccgctcgacgac
ccgaagccatacgaactattccagcggggggagacaaacgccattttccagtttgaatcc
gacgggatgaagaagtacatgaaggacctgaagcccgaccggtttgaggacctcattgcg
atgaacgccctctatcgacccggtcccattcagtacatcccgaacttcatcaaccggaag
cacggccgtgaagaggtgaagtacgacatgcccgagatggaggagtatctggcggatacc
tacggcatcacggtgtatcaggagcagttgatgctcttgtcgcagaagctgggcaacttc
accaagggcgacgccgacgtgctgcgcaaggcgatgggtaagaaagaccgcgccacgctc
gacaagatgaagggcaagtttatggagggctgtgccgccaacaaactgcctgttaaaacc
tgcgaaaaagtatggaccgactgggaagccttcgcctcctacgccttcaacaaatcgcac
tcgacctgctacgccttcgtagcctaccagacggcctggctcaaggcgcattaccgttcg
gagtacatggcggcggttttgacgagctgcctcggcaacattgagaaaattaccttcttc
ctcgaagaatgtaagaacatcaacatcccggtgctaggccccgacgtgaacgaatcggag
cgggtgtttggcgtgaataagaagggcgaaattcggttcgggctgggtggtatcaagggc
tcgggcgacgcagccgtcgaaaacatcattgccgaacgtacccagaatggcccttaccag
gatatgttcgatttcatcacgcgggtaaacctccggacggtcaacaagaaaacaatcgaa
tcgctggcctacgccggggctttcgatgccctcgaccccgacatccaccgggcgcagtat
ttcgagacggcacccggcgacacgagcacgttcatcgagaagattatccgctacgccaac
aaccaccacgccgagaaatcggcctcgcagcagtcgttgtttggtggtggggcaggtaac
gacgtggccatgccccggcccaaaccgcccgtggtgacgccctggaatcagatcgagaag
ctcaagttcgagaaggatgtcgtcgggttttatatcaccggccacccgctcgatgaattc
accgtcgagctggaagggttctgcaactgcacgctcgataaggtctacgaaaccaatgcg
cccgaactgcgcatcggcgggatcgtgtcgagtgtgcagacgcgcatcgccaaaaacggg
aacccgttcatgatcttcaagctcgaagactaccaagggtcgatggagatgacgctcttt
ggggaagactacgcccgtatggcgcagtacgtggagcccggactgtttctgcacgtgacg
ggcaaaacccaaaaccgctggaactccgatcagctggagtttaagccgaccaacatccgc
tacctcagcgatatccgcgagaagatgtgcaaggaactggccattaccatcaacctggcc
ttcttgagcgaggaactgattggggtcatcaatgacctggtgaaggcgcacccaggtacg
tgtacgctgtcgatgaaagtaaaagatcccgacgagcccgtggaagtaaacttattgtcg
cgccaataccgggtcttccccgacaaccgcctgctgaacgcgctccgctcgatggatggg
gtgcattgtaaagtcgcttag
DBGET
integrated database retrieval system
