Fibrella aestuarina: FAES_4902
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Entry
FAES_4902 CDS
T02429
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fae
Fibrella aestuarina
Pathway
fae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FAES_4902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fae03019
]
FAES_4902
03400 DNA repair and recombination proteins [BR:
fae03400
]
FAES_4902
Enzymes [BR:
fae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FAES_4902
Messenger RNA biogenesis [BR:
fae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FAES_4902
DNA repair and recombination proteins [BR:
fae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FAES_4902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
HTH_40
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HTH_7
GARS_N
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
CCH02901
UniProt:
I0KFJ8
LinkDB
All DBs
Position
6053108..6055315
Genome browser
AA seq
735 aa
AA seq
DB search
MLFDATPLPVTQSAMPQGSVADPAVYLKRYYGYDRFRPMQEAVIRSILSGRDTVVLMPTG
GGKSVCFQIPALMQPGLCVVVSPLIALMKDQVEAMHLNGIAAAYINSSQGAKEIRAVEEN
CRKGQIKLLYVSPEKLLSESFYTFLNSLKLSMFAIDEAHCISSWGHDFRPEYTQLNTLRR
WFPNVPIIALTATADRLTRQDIADRLAMHDPAVFIDSFNRTNLSLQVLPGTNRIGQIAKL
LSLKPDTSGIIYCLSRKSCESVAAKLIEKGYSAAYYHAGMDPNERARVQEAFLRDDVRIM
CATIAFGMGIDKSNVRWVMHYNMPKNIEGYYQEIGRAGRDGLPSQTVLFYSFADVATYKD
MLTENNPANLQVQLAKLERMQQYAEANTCRRQILLSYFSEQLAEPCGNCDVCRNPRVTFD
ATVLAQKALSAIIRLGERVPMNTLIDVLRGSRNYAIVSQGYDKIKTYGAGADLKFEEWRN
YLHQLINIGVIEIAYENHYALRKGLLADDVLFKGKTISLVRPDDVPKPVVEKATRTRTEG
TRDDLFERLRALRKRIADAQNVPPYVVFTDSTLEDMARQRPTTPDAFRNVSGVGERKLEM
FGEAFLDEITAYVGVSRGTSQVRSEVPSRSREVAKPKGTTQQMTFELYQQGLTIDQIAKA
RELGPSSIANHLIQLNRGGYDVDLERLITPAERRAIEAAIATVGIEDNRTKPVFDHLEGK
YDYGKINLTIALMER
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgctttttgatgccacaccccttcccgtaacccagtcagccatgccgcagggctccgtt
gccgaccccgcggtttacctgaaacggtactacggttacgaccgcttccggcccatgcag
gaggccgtgatccggtctattctgagcgggcgcgatacggtagtgctgatgccgacgggc
gggggcaagtcggtctgttttcagattccggccctgatgcagcccggcctgtgcgtggtg
gtgtcgccgctgattgcgctgatgaaagatcaggtcgaggctatgcacctcaatggcatt
gcggcggcctacatcaacagttcgcagggcgcgaaggaaatccgggcggtggaagaaaac
tgccgcaaaggccagatcaaactgctctacgtgtcgcccgaaaagctgctttcggagtcg
ttttacacgtttctgaacagcctcaaactctccatgttcgccatcgacgaagcgcactgc
atttcgtcgtgggggcatgatttccgacctgaatacacgcagttgaacacgctgcggcgg
tggtttcccaacgtacccatcatcgcgctcacggctactgccgaccgcctcacgcggcag
gacatcgccgaccggctcgccatgcatgacccggcggttttcatcgactcgtttaaccgc
acgaacctgagtttgcaggtgctgcccggcaccaatcgcatcgggcagattgccaagctg
ctgagccttaaacccgacacgtcgggcattatctattgcctcagccgcaagtcgtgtgag
tcggtagcggccaaattgatcgagaagggctactcggcggcttactaccacgcggggatg
gaccccaacgaacgcgcccgcgtgcaggaggcctttctgcgcgacgacgtgcggattatg
tgcgctaccatcgccttcgggatgggcatcgacaagagcaacgtgcgctgggtgatgcac
tacaacatgcccaagaacatcgagggttattaccaggaaattggccgtgccgggcgtgat
gggcttccgtcgcagacggtgctgttttacagcttcgccgacgtagccacctacaaggac
atgctgacggagaacaacccggccaacctacaggtgcaactggcgaagctggaacggatg
cagcagtatgccgaagccaacacctgccggcggcagattctcctctcctatttctcggaa
caactggccgaaccctgcggcaactgcgacgtgtgccgcaacccgcgcgtaacgttcgac
gccaccgtattggcccagaaagcgctgtcggccattattcggctgggtgagcgcgtgccg
atgaacacgctgatcgacgtgctacggggctcgcgcaactacgccatcgtatcgcagggg
tacgacaaaatcaaaacctacggcgccggggccgacctgaagtttgaggagtggcgcaac
tacctgcatcagctcatcaatatcggcgtgattgagatcgcctacgaaaaccactacgcc
ctgcggaaagggttgctggccgacgacgtgctgttcaaaggcaaaaccatcagcctcgtc
cggcccgacgacgtacccaagccggtggttgaaaaagcgactcgtacccgtaccgaaggc
acgcgcgacgacctgttcgagcggctgcgggcgctgcgcaaacgcattgccgacgcgcag
aacgtgcccccctacgtggttttcaccgactcgacgctggaagacatggcccggcagcga
cccactacgcccgacgccttccgaaacgtgtcgggggtgggcgaacgcaaactggagatg
tttggcgaggccttcctagacgagattacggcttatgtcggcgtcagcaggggcacgagt
caggtacgtagcgaggtgccgagccggtcgcgcgaggtggcgaagcccaaaggaaccacc
cagcaaatgacgttcgaactttaccagcagggcctgactatcgaccagattgccaaggcg
cgcgaactgggcccgtccagcatcgccaaccacctgattcaactcaatcggggcggctac
gacgttgatctggaacgcctgatcacccccgccgaacgccgcgccatcgaggccgcgatt
gccaccgtcggcatcgaagacaatcgcaccaagcccgtttttgatcacctcgaaggcaag
tacgactacggcaaaatcaacctgacgattgcgttaatggagcggtag
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