Fibrella aestuarina: FAES_5230
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Entry
FAES_5230 CDS
T02429
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
fae
Fibrella aestuarina
Pathway
fae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FAES_5230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fae03400
]
FAES_5230
Enzymes [BR:
fae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FAES_5230
DNA repair and recombination proteins [BR:
fae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FAES_5230
RecFOR pathway proteins
FAES_5230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
nSTAND3
Mg_chelatase
AAA_14
TIP49
AAA_22
AAA_16
NB-ARC
RNA_helicase
NTPase_1
TsaE
Rad17
Bac_DnaA
Sigma54_activ_2
AAA_33
NPHP3_N
AAA_PrkA
AAA_18
DUF815
ABC_tran
AAA_24
bpMoxR
NACHT
AAA_28
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CCH03229
UniProt:
I0KGH6
LinkDB
All DBs
Position
6443701..6444729
Genome browser
AA seq
342 aa
AA seq
DB search
MRKDFMTGSGDAMSATEKEIERALRPLSFEDFTGQAKVLDNLEVFVKAAMQRGDALDHVL
LHGPPGLGKTTLSHIIANELGANIKMTSGPVLDKPSDLAGLLTNLQQNDVLFIDEIHRLN
PIVEEYLYSAMEDYKIDIMLDSGPNARTVQIKLNPFTLIGATTRAGMLTSPLRARFGINC
RLEYYDAKLLTTIVQRSSAILGTAIDEDGAFEIARRSRGTPRIANNLLRRTRDFAQVKGN
GYINVAIAEIALNALDVDQHGLDEMDNRILSTIIEKFKGGPVGLSTIATACGEESETIEE
VYEPFLIQEGFLKRTSRGREATEKAYFHLGVVPGMRNGELFN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaggattttatgaccgggtcgggggatgcgatgtcggctacggagaaggaaatc
gaacgggcattacggcccctttcgttcgaagactttaccgggcaggccaaagtcctcgac
aacctggaggtcttcgtcaaagcggcgatgcagcgcggcgacgccctcgaccacgtgctg
ctccacggccctccgggtctgggtaaaacaacgctatcgcacatcattgccaatgagttg
ggggccaatatcaaaatgacctcgggccccgtgctcgacaaacccagcgatttggcgggc
ctgctgaccaaccttcagcaaaacgacgtgctgttcatcgacgagattcaccggctcaac
ccaatcgtggaagagtacctgtattcggcgatggaagattacaagatcgatatcatgctc
gactcgggcccgaatgcccgcaccgtgcagattaagctcaatccgtttacgctcatcggg
gccaccacccgcgccgggatgctcacctcccccctgcgcgcccgcttcgggatcaactgc
cgccttgagtattacgacgccaaactgctcacgaccatcgtgcagcggtcgtcggctatt
ctggggacggctatcgatgaggacggcgcctttgagattgcccgccgcagccgcggaacg
ccgcgtatcgctaacaacctgctgcgccgcacgcgcgacttcgcgcaggtgaagggtaac
ggttacatcaacgtcgcgatcgccgagatcgcgctgaacgcgctcgacgtcgatcagcac
gggttggatgaaatggacaaccgtattctgtcgaccatcatcgagaaattcaaagggggc
cccgtcgggctgtcgaccattgccacggcctgcggcgaggagtcggaaacgatcgaagaa
gtgtacgaaccgttcctgattcaggagggctttctgaaacgtacctcgcggggccgcgaa
gccaccgagaaagcctatttccacctcggcgtggtaccaggcatgcgcaacggggagttg
ttcaactaa
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