Fibrella aestuarina: FAES_5471
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Entry
FAES_5471 CDS
T02429
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fae
Fibrella aestuarina
Pathway
fae03420
Nucleotide excision repair
fae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FAES_5471
03430 Mismatch repair
FAES_5471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fae03400
]
FAES_5471
Enzymes [BR:
fae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FAES_5471
DNA repair and recombination proteins [BR:
fae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FAES_5471
MMR (mismatch excision repair)
Other MMR factors
FAES_5471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CCH03470
UniProt:
I0KH67
LinkDB
All DBs
Position
6733038..6735338
Genome browser
AA seq
766 aa
AA seq
DB search
MIDYIAGLNDPQREAVVHGNGPLMIIAGAGSGKTRVLTYRIAHLIDKGVDPFRILALTFT
NKAAGEMRHRIEKVIGNEARNIWMGTFHSVFAKILRIEAQALGYTSNFSIYDTDDSKSLL
RSIIREMGLDDKQYRANAVFNRISGAKNRLVGAEEYLLNPIIQADDSSAKMPEVGRIYKE
YARRCFAANAMDFDDLLFNTNVLFRDHLDILHKYQHKFQHVLVDEFQDTNVSQYLITRKL
AAVHQNICVVGDDAQSIYAFRGANIENILNFQKDYGKDTVKIVKLEQNYRSTNTIVQAAN
SVIARNRNQLEKRVFTDNETGPLIEVIKAASDNEEGRLVANGIFEAKVQQGLRNNDFAIL
YRTNAQSRAFEEALRKLSIKYRIIGGLSFYQRKEIKDLIAYLRFTVNQADEEAFKRIINL
PKRGIGDTTLAKIAVLASEKNVPIWEIVSNISLYVAGRAMMAIEGFAELIKSFGLMLDKK
DAYEVAAHVAKSSGILKELYEDKTVEGLARYENVQELLNAIKEFVDNPETEDKSLSSFLQ
TVSLLTTADEKEDDGDNDKVTLMTIHAAKGLEFKNVHIVGLEEDLFPSQMMLESRADLEE
ERRLFYVAITRAEKKLTFSFAESRYHYGRLKLCEPSRFLMEVDQTYLSMAKTPTPPKPRF
NGDDNYASRNRDEMPSAGSMNFVRTLAQKTAQRQVPQPTVTHTPSADFAPSNTAELAAGQ
RVEHAKFGFGTVKSMDTNGTERKAVIQFDVAGEKTLLLSFAKLRIV
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgatcgattatatagctgggttgaacgatccgcagcgtgaagcggtggtccacggcaac
gggccgctgatgattatcgcgggggcgggttcgggcaaaacgcgcgttctgacgtatcgc
attgcgcaccttatcgacaagggggttgacccctttcggattctggcgcttaccttcacc
aacaaggccgccggcgagatgcgtcaccgcatcgagaaggtaattggcaacgaggcccgc
aacatctggatgggtacgttccactcggtgtttgccaagattctgcgcatcgaagcgcag
gccctgggttataccagtaacttctccatctacgataccgacgattcgaagtcgctgctg
cggagcatcatccgcgagatgggcctcgacgataaacagtaccgcgccaacgccgttttc
aaccggatttcaggcgcaaaaaaccggctggtcggcgccgaagaatatctgctcaacccg
attattcaggccgatgattcctcggccaagatgccggaggttggtcggatttataaggaa
tacgcccggcggtgctttgcggctaacgccatggatttcgacgatctgctgttcaacacg
aatgtgttgttccgcgatcacctcgacatcctacataagtatcagcacaagtttcagcac
gtgctggtcgatgagtttcaggataccaacgtgtcgcagtacctcatcacgcgcaagctg
gcggcggtgcatcagaacatctgcgtggtgggcgacgatgcccagagtatctacgcgttc
cggggcgccaacatcgaaaacatcctgaatttccagaaagattacggcaaagacaccgtc
aagatcgtcaagctggagcagaactaccgcagcaccaacaccatcgtgcaggcggccaat
tcagtgattgcccgcaaccggaatcaactggagaaacgcgttttcaccgacaacgaaacc
ggcccgctgattgaggtgatcaaagcggcctcggacaatgaagaggggcggctggtggcc
aacggcatttttgaagcgaaggtgcaacaaggcctgcgcaacaacgacttcgccattctg
taccgcaccaacgcccagtcgcgggccttcgaggaagccctgcggaaactgagcatcaag
taccggatcatcgggggtctttcgttctaccagcgcaaagagatcaaggatctgatcgcc
tatttgcgttttacggtcaatcaggccgacgaagaagcgtttaagcggattattaaccta
cccaaacgcggcattggcgataccaccctggccaagattgcggtgttggccagcgaaaag
aacgtacccatctgggagatcgtcagtaacatttcgctctacgttgccgggcgagccatg
atggccattgaaggctttgccgaattgatcaagagcttcggcctgatgctcgacaagaaa
gatgcttacgaggtagcggcccacgtggcgaagtcgtcgggcatcctgaaagaactgtac
gaagacaaaaccgtggaagggctggcccgctacgaaaacgtgcaggaattgctgaacgcc
attaaggagtttgtcgacaaccccgaaacggaagacaaaagcctcagttcgttcctgcaa
acggtgtcgctgctgactaccgccgacgaaaaagaagatgacggcgacaacgacaaggta
acgctgatgaccatccacgccgccaaagggctggagttcaaaaacgtacacatcgtgggg
ctggaagaagacctgtttccgagccagatgatgctcgaaagccgcgccgatctggaggag
gaacgtcgactgttctacgtggccatcacccgcgccgaaaagaagctgacgttctccttt
gccgagtcgcgctaccactatggccgcctgaaactctgcgaacccagccggttcctgatg
gaagtcgatcagacgtacctgagcatggcaaaaacgccgacgccgcccaaaccgcgcttc
aacggcgacgacaattacgccagccgcaaccgcgacgaaatgccctctgccggttcgatg
aatttcgtgcggacgctggcgcagaaaacggcacagcggcaggtaccccagccaaccgtc
acgcataccccctcggccgattttgcccccagcaacaccgcagagctagccgccgggcag
cgggtcgagcacgccaaattcggtttcggcaccgttaaatccatggataccaacggcacc
gaacgcaaagccgtcattcagttcgacgtagctggtgagaagacgctcctgctcagtttc
gccaagctgcgaattgtatag
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