Fervidibacillus albus: OE104_05380
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Entry
OE104_05380 CDS
T08860
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
faf
Fervidibacillus albus
Pathway
faf03030
DNA replication
faf03430
Mismatch repair
faf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
faf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OE104_05380
03430 Mismatch repair
OE104_05380
03440 Homologous recombination
OE104_05380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
faf03032
]
OE104_05380
03400 DNA repair and recombination proteins [BR:
faf03400
]
OE104_05380
Enzymes [BR:
faf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OE104_05380
DNA replication proteins [BR:
faf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OE104_05380
DNA repair and recombination proteins [BR:
faf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OE104_05380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
Rv2179c-like
HHH_3
DNA_pol_A_exo1
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
WAA10750
UniProt:
A0A9E8LW22
LinkDB
All DBs
Position
1078384..1082694
Genome browser
AA seq
1436 aa
AA seq
DB search
MTNQKEHEKRERFQILLNQIEFNDDQRVPYFQNGKIEKLIVERETKTWLFHFSLPTILPF
SVFQQFALQLQRAFQHIATVHFTIETKQKELEPKNVVDYWQYCIKQLDGMSPALLSLLND
QIPKVSGNQLFVYARNEMEAITLKKKYGEPIIRIYEQCGFPPLQFHIEDQYKEDNGEYAE
FLEKKKQEDEIRAKQAIVEMQRRQETNVESEQKEGPVVIGYPIQPDQQVRRLEEITEEER
RIVVEGYIFECETKVLRSGRTLLECKITDYTNSILVKMFSKDTKEDGEKLKQVKKGMWIR
VRGNVQNDTFVRDLVLIANDINEIKGKERTDTAETKRVELHLHTPMSQMDAVSSVNALVT
QAKKWGHKAVAITDHSVAQSFPEAYYAGQKNDIKIIYGMEANVVDDGIPIAYNPTHRKLD
EETYVVFDVETTGLSAMYHKIIELAAVKIQNGEIIDRFESFANPKHPLSATTIELTGITD
EMVKNAPDVEDVLQDFYEWSKYTTLVAHNASFDISFLNAGYDKIGFGKVTNPVVDTLELA
RFLYPELKNHRLNTLAKKFNVELTKHHRAIYDAEATGHLLIKMLKDVEQKGIFYHDELNE
YGKNETAYQRTRPFHCTILVKNHTGLKNLFKLISLSHIQYFYRVPRIPRSVLQTYREGLL
IGSGCGVGELFEAAQQKPLEELEEIGKFYDYFEVHPKEVYQTDDVFESEKQVEETIAKIV
SLGEKLDIPVVATGNVHYLHPEDKIYRKILIASQGGANRLNRQTLPDVHFRTTDEMLTSF
QFLGQEKAEEIVVTNSNKIADFIETVKPIKDDLYTPKIEGAEEEIRSMSYRQARNIYGDP
LPEIVEKRLEKELKSIIENGFAVIYLIAHKLVKKSLDDGYLVGSRGSVGSSFVATMTEIT
EVNPLPPHYVCPSCQHSQFFNDGSVGSGYDLPDRNCPKCGTLYKKDGHDIPFETFLGFKG
DKVPDIDLNFSGEYQPTAHNYTKVLFGEDYVYRAGTIGTVADKTAYGFVKGYAEDHQLVL
RQAEIDRLSKGLTGVKRTTGQHPGGIIVVPDYMDIYDFTPIQYPADAQDSEWRTTHFDFH
SIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFRTTEPLGVTEEQIMC
KTGTLGIPEFGTRFVRQMLEDTNPTTFSELVQISGLSHGTDVWLGNAQELIRNGTCTLSE
VIGCRDDIMVYLIYQGIEPSLAFKIMESVRKGKGLTEEMESEMRKQNVPDWYIDSCKKIK
YMFPKAHATAYVLMAVRIAYFKVHHPLLFYAAYFTVRAEDFDLEAMIRGSNAIRARILEI
EEKGIGASQKEKNLLTVLEIALEMCERGFSFKNIDLYRSTASEFIIDGNSLIPPFNAVPG
LGTSVAMNIVKAREKGEFLSKEDLQQRGKVSKTILEYLEKQGCLDSLPEQNQLSLF
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
ttgactaatcaaaaggagcacgaaaaacgagaacgattccaaatattattaaatcaaatc
gaattcaacgatgatcaaagggtcccgtattttcaaaacggaaaaattgaaaaattgatc
gtggagcgagaaacaaaaacgtggctctttcattttagcttaccgacaattcttccattt
tccgtttttcaacagttcgccctccagttacaaagggcatttcaacatatcgcgaccgta
cattttacgattgagacgaaacagaaggaactcgaaccgaaaaacgttgtcgactattgg
cagtattgtataaagcagttggacggaatgtctcccgcattactttctttattgaatgat
caaattccgaaagtttccggaaatcaattgttcgtttatgcaagaaatgagatggaggca
ataacgttaaagaaaaaatacggtgagccgattattcgaatttacgaacaatgcggtttt
ccacctcttcagtttcatatcgaggaccagtataaagaagataacggggaatatgcggaa
tttctcgaaaaaaagaagcaggaagatgaaatccgagcgaaacaagcaatcgttgaaatg
caaagaagacaggagacgaacgtggaatcggaacaaaaggaaggtccggtcgtcattgga
taccctatacagcccgaccaacaggttcggagattagaagagattaccgaagaagaaaga
agaatcgtcgttgaaggatatattttcgagtgtgaaacgaaagtacttcgaagtggtcgg
accttattggaatgtaaaataacggactatacgaattctattttagtgaaaatgttttcg
aaagatacgaaggaagacggtgaaaaactgaaacaagttaaaaaaggaatgtggattcgc
gtccgtggaaacgttcaaaacgacaccttcgtccgtgacctcgttttaattgccaacgac
attaatgaaatcaaaggaaaagaaagaacggacacggcggaaacgaaacgggtggagttg
catttgcacacgccgatgagtcaaatggatgctgtatcatcggtcaacgcccttgtcacc
caagcaaaaaaatgggggcataaagctgttgctattaccgatcattcggtagcccaatcg
tttccagaagcgtattatgccggacaaaaaaacgacattaaaatcatttacggcatggaa
gcaaacgtcgtcgatgacggaattccgattgcctataatccgactcaccggaaacttgac
gaggaaacgtacgtcgttttcgatgtggaaacgaccggattatctgccatgtatcataaa
attatcgaattagctgctgtaaaaatacaaaacggagaaattatcgatcgatttgaatcg
ttcgcaaatccgaaacatccattgtcagcgacgacgatcgagttgacagggattaccgat
gagatggtgaaaaacgcaccggatgtggaggacgtattacaagacttttatgaatggtca
aagtatacgacgttggtagcccataatgcctcctttgatattagttttctaaatgctgga
tacgacaaaatcggctttggaaaagttacgaatccggtagttgacactttggaattggca
cgatttttatacccggaattaaaaaatcaccgtttaaatacgttagcgaaaaaattcaat
gtcgaattgacaaaacaccatcgggctatttatgacgcagaagcgacgggccatttattg
attaaaatgctcaaagatgtggaacaaaaaggaattttttatcatgatgaattaaacgaa
tacggaaaaaatgaaacggcttatcaacgaacgcgcccatttcactgtacaatccttgtc
aaaaatcataccggcttgaaaaatttatttaaattaatttcactatcccatatccaatat
ttttatcgcgtacctcgtataccgcgatcggttttacaaacgtatcgagaagggctattg
atcggatccggttgtggggtgggggaattattcgaagcagcccagcaaaaaccgttggaa
gaattagaagaaatcgggaagttttacgactatttcgaagtgcatccaaaagaagtgtat
caaacggatgatgtgttcgagtcagaaaaacaagtggaagaaacgatcgccaaaattgtc
tccctcggtgaaaaattggacatcccagtcgttgcgacgggaaacgttcattatttgcac
ccggaagataaaatttatcgaaaaatattaatcgcttcccaaggtggagcgaatcgactg
aatcgacaaacgttaccggatgtccatttccgtacgaccgatgaaatgttaacatccttt
caatttttaggacaagaaaaggcagaagaaatcgtcgtaacgaattcgaataaaatcgcc
gacttcatagaaacggttaaaccgatcaaagatgatttatatacaccgaaaatcgaagga
gccgaagaagaaattcgttcgatgagttaccgacaagcacgaaacatttacggagatccc
cttccagaaatcgttgaaaaacgactggaaaaggaattgaaaagtattattgaaaacgga
tttgcagtcatttatttgatcgcccataagcttgtgaaaaaatccctcgacgatggatac
cttgtcggatcaaggggatcggtcggttcttcctttgttgcgacaatgacggaaatcacg
gaagtaaacccgttgcctccccattatgtatgcccgtcatgccaacattcacaatttttc
aatgacggttctgtcggaagtggatacgacttgccggatcgaaattgtccgaaatgcggt
accctttacaaaaaagacggccacgatattccgtttgaaacatttctaggttttaaagga
gataaagtaccggatatcgatttaaacttctctggagaatatcagccgaccgcccataat
tacacgaaagtattgttcggtgaagattacgtatatcgggcggggacgatcggtaccgtt
gccgataaaaccgcctatggattcgtcaaagggtatgcggaggatcatcagttagttttg
cgacaagcggagattgaccgattatcgaaaggattaacgggtgtaaaacgaacaaccggt
caacacccaggagggattatcgtcgtcccagattacatggatatttatgactttacgccg
atccaataccctgccgatgcccaagattctgaatggcgaacgacccatttcgatttccat
tcgatccacgacaacttattaaaattggatatactcgggcacgatgatccgaccgtcatt
cgtatgttacaagatttaagcggcatcgatccaaaaacgataccgacggacgatccggaa
gtgatgaaaatctttcgtaccacagaacctcttggggtaacagaagaacaaattatgtgt
aaaacaggtactttaggaattccggaattcggaactcgttttgttcgacaaatgcttgaa
gatacgaatccgacgacattttctgaacttgtacaaatttccggactctcccatggaacc
gacgtttggctcggaaatgcccaggaattaatccgcaacggaacctgtacgttgagcgaa
gtaatcggatgtcgggatgacattatggtttatttgatttatcaaggaatcgaaccgtcc
ctcgcctttaaaattatggaatccgtccgaaaagggaagggacttaccgaagagatggaa
tcggaaatgcggaagcaaaacgtgccggactggtacatcgattcgtgtaaaaaaattaag
tatatgttcccgaaagcccacgctactgcttacgtactgatggctgttcggatcgcctat
ttcaaagtccaccatccgttattgttttatgcagcatactttaccgttcgtgcggaagac
tttgatctagaagcgatgattcgcggttcaaatgcgattcgagcgcgtatattggaaatt
gaagaaaagggaatcggcgcgtctcaaaaggaaaaaaatttgttaacggtattggaaatc
gccctcgaaatgtgtgaacgcggtttttcatttaaaaacatcgacttgtaccgctctacc
gcttcggaatttattatcgatggcaactcccttattccgccgttcaacgcggttccaggt
ctcggtacttccgttgcgatgaatatcgtcaaggcgagggaaaaaggggagtttttgtcg
aaggaagatttgcaacaacgcggaaaggtttcgaagacgattttagaatacttggaaaag
caaggttgtctcgattcgttaccggaacaaaaccaattatcgcttttttaa
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