Fervidibacillus albus: OE104_05420
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Entry
OE104_05420 CDS
T08860
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
faf
Fervidibacillus albus
Brite
KEGG Orthology (KO) [BR:
faf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
faf03016
]
OE104_05420 (truB)
Enzymes [BR:
faf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OE104_05420 (truB)
Transfer RNA biogenesis [BR:
faf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OE104_05420 (truB)
Prokaryotic type
OE104_05420 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF7485
DUF7595
Motif
Other DBs
NCBI-ProteinID:
WAA10758
UniProt:
A0A9E8RX42
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All DBs
Position
1088121..1089047
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AA seq
308 aa
AA seq
DB search
MNGILPLWKPSGLSSHDCVVKLRKRLGTKKIGHSGTLDPSVTGVLPIVIGEATKIVQFIQ
NEKKSYEGTVTIGYSTTTEDADGDIVEQKVIKNPIDREDILRVFQKLTGEITQVPPMYSA
VKVDGKRLYEYAREGKTVQRPERKVTIFELLLLDDDDQFDGDPIRINFRVKCSKGTYIRT
LAVTIGEMLGYPAHMSNLVRIESASITKAHCLTFDQVEKLVEMGQIEEALLPIETVLDRL
PKYEIRDTLATRVKNGAVLKTPESLRTIDEPIAIINSGKIIALYQKHPTKTGFIKPIRVL
NRDVDFKQ
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaattttacccctatggaagccttccgggttatcttcccacgattgcgtcgtg
aaattacgaaaacggttaggcacgaaaaaaatcggacattcaggaactttagatccgagc
gtaaccggtgtattaccgatcgtcattggggaagcaacgaagatcgtgcaatttattcaa
aatgaaaagaaaagttacgaaggaacagtaacgatcggttattcgacaacgacggaggat
gccgatggggatattgtagaacaaaaggtgataaaaaatccgattgatcgagaagacatt
ttacgagtatttcaaaaattaaccggtgaaattacccaagttcctccgatgtattcggct
gtaaaggtagatggaaaacgattatacgaatatgcgagggaagggaaaacggttcaacgt
ccggaaaggaaagtgactattttcgaacttcttttattggatgatgatgatcaattcgat
ggggatccgattcgtattaacttccgggtgaaatgtagcaaaggaacgtacattcgcact
ttggcagtaacgatcggtgaaatgttagggtatccggcccatatgtctaatctcgtacga
atcgagtctgcaagtattacgaaagcacattgtctcacctttgaccaagttgaaaaactg
gtggaaatggggcagattgaagaggcgttactaccgattgaaacggtcttggatcgattg
ccgaaatacgaaattcgtgatacgctagctactagagtgaaaaatggggcagtcttgaaa
acaccggaatcgttacgtacaatcgacgaaccgatcgcgatcatcaattctggaaaaatc
attgccctctatcaaaaacatccgacgaaaaccggattcatcaaaccgatccgcgttttg
aatcgggatgtcgattttaaacaatag
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