Fervidibacillus albus: OE104_08560
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Entry
OE104_08560 CDS
T08860
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
faf
Fervidibacillus albus
Brite
KEGG Orthology (KO) [BR:
faf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
faf03400
]
OE104_08560 (addB)
Enzymes [BR:
faf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OE104_08560 (addB)
DNA repair and recombination proteins [BR:
faf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
OE104_08560 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
ATPase_2
DEAD
Motif
Other DBs
NCBI-ProteinID:
WAA08694
UniProt:
A0A9E8LTU6
LinkDB
All DBs
Position
complement(1748084..1751554)
Genome browser
AA seq
1156 aa
AA seq
DB search
MSLRFVIGRTGSGKTTFLMEEMINELQTDPMGEPIYYIVPEQMTFLSEYKLVTNPKIKGM
FRVQVYSFTRLAWRILQETGGIRRIHLNSSGLSMLIRRIINENKKEFKIFKRSSEQFGFI
EQMEKTISELKRYCVSENELSNHWNRKEINQQLKDKLHDMDIIYRQFEQAIKDQYVGNED
YLTLLAEKIRDSETIKQATIYIDGFHSFTPQEFAVIEQLMKNAKRVTVALTVDVPYRNTV
PDDLQLYRMTGNTYASLFEIAQLYSIPIEKDVLLTDQHRFTVPSLRHLERYFDRLPVPSF
TDKGEVILAESANPRAEIEGVARSILSFVRDEHYQFNDIAIFVRNGETYHELFETVFTNF
DIPYYIDRKRSMLNHPLIELIRSTLEVITGNWRYDPVFRAIKTDLLFPMDDRIDLWREKM
DRLENYCLAFGVQGEKWTRKERWQYKKYRGLDFERPQTNEELALENELNESRMQISTPII
QLANRLKKAKNGKEFCQGLYLYLEQLDIPAKLEKWKLEAEQQGNLTLGRQHEQAWNSVID
LFDQYVEILGEEKTTIKEFASVIESGLESLTFSILPPALDQVIIADMELSRLADVKIAFV
VGLNDGVLPKKYQDDSIFSDEDREMLQTFGMHLAPSTKERLADEEFIAYKAFTMASDHLV
LTYPLADSEGKALLPSPYIKRLKAMFPLIEERFFGNEPNDLPLAEQLAYLVNWREAITHV
TYQLQLLKKNYPVEPIWWDAYNLLIKKGKKREAMNVFASLFYENKPVSLSESTAKELYGE
KIQGSISRMEQFNSCPFSHYLSYGLKLKEREVFRLEAPDIGDLFHGALKIIGERIQHANL
SWAKLTNDQIQSLVRESVDTLAPKLQNEILHSTNRYQYLKRKLEKVIWRATSVLSEQAKV
SGFSPVGMEVSFGPKGKLPPVQFHLKNGTKMELAGRIDRIDKGENESGIFLRVIDYKSSS
RDLNLGEVYYGLSLQMLTYLDIILRYSKQLIGQEADPAGVLYFHIHNPTIKVKKPLTIEE
IEEEIFKQFRMQGLMLSDADVIRMMDQTLENGTSKIVAAGLKKDGTLRSNSKVASKQDFD
MLRTYIHRTFEQTGNDIVNGRVDLSPYKLKDKTPCRFCPYKSVCQFDTTLEENNYRVLSP
LDGKEALDLVKGVVQT
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgtcactccgctttgtaatcggtcggacaggcagtggaaaaacaacctttttaatggag
gaaatgattaacgaactgcaaacggatccgatgggggaaccaatttattacatcgttccc
gaacagatgacatttttatcggaatataaactcgtaacgaatccgaaaattaaagggatg
tttcgggtgcaagtatatagttttacccggttagcatggagaatattacaagaaaccggg
ggaattcgtcggattcatttgaattcgagtggattaagtatgttaatacgtcggattatt
aacgaaaacaaaaaagagtttaagatttttaagcgaagttcggagcaatttggattcatt
gagcaaatggaaaaaacaatttccgaattgaaacggtattgcgtttcagaaaacgaactt
tccaatcattggaatcgaaaggaaataaatcaacaattaaaagataaactccacgatatg
gatatcatttatcgccaatttgaacaggcaatcaaagaccagtacgtcggaaatgaagat
tatttgacacttttagccgaaaaaatccgtgattcagaaacgatcaaacaggcgaccatt
tatattgacggcttccatagttttactccccaagagttcgccgtcatcgaacaattaatg
aaaaatgcaaaacgagtgacggtcgctttaaccgtcgatgttccatatcgaaacacggta
cccgatgatcttcaactataccgaatgacaggaaacacgtatgcgtccctttttgaaatc
gcccaattgtacagcattccaattgagaaggatgttctgttaacggaccaacaccgtttt
accgtaccatcccttcgacatttggaacggtattttgatcggttgccggttccatccttt
acagataagggagaggttattcttgcggaatcggcaaatcctcgagcggaaatcgaaggg
gtagctagaagcattttatcctttgtccgagatgaacattatcagtttaacgatattgcc
attttcgttcgaaacggtgaaacgtatcatgaactatttgaaacggtgtttacaaacttc
gacattccctattatatcgatcgaaaacgatccatgttgaaccatcctttgattgaactc
atccgttccacattggaagttattactggaaattggcgttatgatcccgttttccgtgcg
atcaaaacggatcttttatttccaatggacgatcggatcgacctttggcgggaaaaaatg
gatcggttggaaaactattgtctcgccttcggagttcaaggggaaaaatggactcggaag
gaaagatggcagtataaaaaatatcgagggcttgactttgaacggccacagaccaatgag
gaattggcgttggaaaatgaattgaacgaaagtcgaatgcaaatctctactccaattatc
cagttagccaatcgactgaaaaaagcgaagaacggaaaagagttttgccaaggattgtat
ttgtatttggaacaattagacattccagcgaaattagaaaagtggaagctggaagccgaa
caacaaggaaatttaacgttaggaaggcaacacgaacaggcgtggaattcagtcatcgat
ttgttcgatcaatatgtggaaatccttggggaagaaaagacgactatcaaagaatttgct
tccgttattgaatccggattggaatcccttacgttttccatcttgccgcctgctttggac
caagtcattatcgctgatatggaattatcccgattagcagatgtgaaaattgcctttgtc
gtcggattaaacgatggcgttttaccgaaaaaatatcaagatgatagcattttttccgat
gaagaccgggaaatgttgcaaacgtttggtatgcacttagcgccatcgacgaaggaacgt
ttagcggatgaggagttcatcgcatacaaagcgttcacgatggcatcggatcatttagtg
cttacctatccgttggccgattcggaaggaaaggcattgcttccgtctccgtacattaaa
cgactaaaggcgatgtttcctttaatagaagaacggtttttcggaaatgagccgaacgat
ctacctttggccgaacaattggcgtatctcgtcaattggagggaggcgattacccacgtt
acgtaccaattacagctcttaaagaaaaactacccggtggaaccaatctggtgggatgcg
tacaatcttcttataaaaaaaggaaaaaaacgggaagcgatgaacgtgtttgccagtttg
ttttacgaaaataaaccggtctctttgtccgaatcgacagccaaggaattgtatggggaa
aaaatccaagggagcatttcgcggatggaacaatttaatagttgtccgttctcccattac
ctttcctacggtttaaaattgaaggaaagggaagtctttcgattggaagcaccggatatc
ggggacctgttccatggtgctttaaaaataatcggtgaacgaattcaacatgccaatctt
tcctgggcgaaactgacgaacgatcaaattcaaagtctcgtacgggagtctgtcgatacg
ttagcgccaaaattgcaaaatgaaattttacacagtacgaatcggtatcaatatttaaaa
cgaaaactcgaaaaagtcatttggcgagcgacgagcgttctaagtgaacaagcaaaggtg
agcggtttttctcccgtcggaatggaagtctcctttgggccgaaggggaaattacccccg
gtgcaattccacttgaaaaatggaacgaagatggaattggccggtcgaattgatcgaatt
gataaaggggaaaacgaaagtggtatctttttacgggtcatcgattacaagtcgagcagt
cgggatttgaatctcggggaagtatactacggattaagtttacaaatgttaacgtatctc
gatattatattacgttactcaaaacagctcatcggtcaagaagcggatccggcaggcgtg
ctatatttccatattcataacccgacgattaaagtaaaaaaaccgttaacaattgaagaa
atcgaagaagaaatatttaagcagtttcgaatgcaaggactcatgttatcagatgctgat
gtgatacgaatgatggatcaaacgttggaaaacggaacatcgaaaattgtcgctgccgga
ttaaaaaaggacggcacattacgatccaactcaaaggtagcgagcaaacaagattttgac
atgttgagaacatatatccaccgtacgtttgagcaaacgggaaacgacattgttaacggt
cgcgttgacctttccccttataagttaaaggacaagacaccgtgtcgtttttgcccatat
aaatcggtttgccaatttgatacaactttggaggaaaataattatcgggttttatctcct
ttagatgggaaggaagctttggatttggtgaagggagttgttcaaacatga
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