Fervidibacillus albus: OE104_11845
Help
Entry
OE104_11845 CDS
T08860
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
faf
Fervidibacillus albus
Pathway
faf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
faf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OE104_11845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
faf03019
]
OE104_11845
03009 Ribosome biogenesis [BR:
faf03009
]
OE104_11845
Enzymes [BR:
faf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OE104_11845
Messenger RNA biogenesis [BR:
faf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OE104_11845
Ribosome biogenesis [BR:
faf03009
]
Prokaryotic type
rRNA helicases
OE104_11845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
Helicase_RecD
Flavi_DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WAA09252
UniProt:
A0A9E8LTC0
LinkDB
All DBs
Position
complement(2451691..2453127)
Genome browser
AA seq
478 aa
AA seq
DB search
MVKFEDLHLSASTLKSLRRIGFEETTPIQEQTIPLGLEGRDLIGQAQTGTGKTAAFGIPL
IEKVNTRKKHIQCLVIAPTRELAIQVSEELHKIGYEKHVHVLAVFGGQDISRQIRALKKR
PSIIVGTPGRLLDHINRGTIKLSEIHTVVLDEADEMLNMGFIDDIEAILEKVPEKRQTLL
FSATMPEKIRQIALKFMKDPETIKTKSKEMTVPQIEQYFVKVDEREKFDALTRLLDYQSP
DLAIVFGRTKRRVDELSEALSIRGYTAEGIHGDLSQAKRLSVLRKFKEGSIDVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGMAITFVVPREMGYLRVVEETTK
KRMKRMQVPSLAEAIEGQQKIIVDKMIQTIEENDLTLYRKAAEQLLQEQDSISVVSAALK
LLTKEPDNTPVKISYEIPLPVKRDKMYSKGNGKKGNQDRRSRRANKYSGKTGNKQKKK
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaaatttgaagatttacatttaagtgcaagtacactaaagtctttgcgacgaatc
ggttttgaagaaacgaccccgatccaagaacagacgattcctttaggtttggaaggtcgc
gatcttatcggacaggcacaaacgggtacagggaaaacggctgctttcggaatcccgttg
attgaaaaggtgaacacgaggaaaaaacatatccaatgtttagtcattgctccaacgcgg
gaattagcgattcaagtatcggaagaattgcacaaaatcggttacgaaaaacatgttcac
gtattggctgtgttcggtggtcaagacatttcaaggcaaattcgtgcattgaaaaaaaga
ccgagcattatcgtcggtacgcctggaagattacttgatcatattaatcggggtacgatt
aagttgtcggaaattcataccgttgttctagatgaagcggatgaaatgttaaatatggga
tttatcgatgacattgaagccattttggaaaaggtgcctgaaaaacggcaaacgttgtta
ttttccgcaacgatgccggaaaaaattcgtcaaattgcattgaagtttatgaaagatccc
gaaacgattaagacgaaatcaaaggaaatgaccgttccgcaaattgaacaatattttgtt
aaagtggacgaaagggaaaaattcgatgcccttactcgtcttctcgattaccaatcgccg
gatctcgccatcgtgttcggacggacgaagcggcgagtggatgaactttccgaggcgctt
tccattcgtggatatacggcggaaggcattcatggtgatttgagccaagcgaagagattg
tccgttttgcgaaaatttaaagaaggttccatcgatgtactcgtcgcaacggatgtggca
gcaaggggattagatatttccggcgtcacccacgtttataatttcgatattcctcaagat
ccggaaagttatgtccatcgcatcggccgtacgggaagagctggaaaaacgggtatggcc
atcaccttcgtcgtcccgagggaaatgggctatttgcgagttgtagaagagacgacgaaa
aaacggatgaaacgcatgcaagtcccttctttagcagaggctatcgaaggacaacaaaaa
atcattgtcgataaaatgatccaaacgattgaagaaaatgatttaaccctttatcgaaaa
gcagctgaacaattgttgcaggaacaagattctatatccgtcgtgtctgcggctttgaaa
cttttaacgaaagaaccggataatacaccggtaaaaatctcgtatgaaattccattacct
gtgaaacgggataaaatgtattcgaagggaaatggaaaaaaagggaatcaagatcgaaga
agtcgtagagctaataaatatagtggaaagacgggtaataaacaaaagaaaaaatga
DBGET
integrated database retrieval system
