Flavobacterium agricola: K5I29_01160
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Entry
K5I29_01160 CDS
T09474
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
fag
Flavobacterium agricola
Pathway
fag02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fag00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K5I29_01160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fag02000
]
K5I29_01160
Enzymes [BR:
fag01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
K5I29_01160
Transporters [BR:
fag02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
K5I29_01160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
RsgA_GTPase
APS_kinase
ABC_ATPase
AAA_22
DEAD
AAA_29
MMR_HSR1
AAA_15
AAA
nSTAND3
G-alpha
AAA_16
AAA_25
DUF87
AAA_24
Septin
AAA_18
AAA_5
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UYW01567
LinkDB
All DBs
Position
complement(228430..230265)
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AA seq
611 aa
AA seq
DB search
MDENLKKIVPYAKKYKRNVVLNIFFNILYALFSTIGMVFIFPVLQVLFGDGEKVKQLPAY
TGFVDAVSNWQQYLFYYVNIYSEKYGAYYGLMITVGLVIVTFLLKNLSNYFALQNITKLR
NGVLRDLRENMFKKIVSLPVSYYSEKRKGDVMARMLGDVNEVQNSFFLILELIVKEPLTI
AFSLIAMFSISWKLTLFVFIFIPISGLIITKIGKSLKSKSTRAQQENGYLISITEETLSG
LKVVKGYNAEKFFSDLFYNSINRLYKLTNAIAKKNNLAQPMSEFMGIVVIGILLVYGGNL
VLVDKSLNGAQFIAYIGLAYNILTPAKAISKASYQVKNGLAAAERVFEVLEVENPIEDAP
NAKQITGFEKGIEIKNVTFGYNNDEPVLTNFSVNIPKGKTVALVGQSGSGKSTIANLLTR
FYDVNEGEILMDGENIKNVTMHSLRNQMGLVTQDSVMFNGSIADNVKLGKLDATDEEVIK
ALKIANAYEFVQDLPEGLHTNIGDAGNKISGGQKQRISIARAVLKNPPIMILDEATSALD
TESERLVQDALEKMMQNRTSIVIAHRLSTIQKADLILVLQKGKIIEQGTHEQLLALNGTY
SKLVSLQSLEA
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaatttaaaaaaaattgttccgtatgctaaaaaatataaaagaaatgttgtg
ctaaacattttctttaatattctttatgcgctttttagtacaatcggaatggtatttata
ttccccgttttgcaagttttatttggcgacggcgaaaaagtaaaacaattacccgcatat
accggttttgttgatgcggtatccaactggcaacaatatttattttattacgtaaacatt
tattcagaaaaatacggcgcgtattacggattaatgataaccgtaggtttagtaattgta
acctttttacttaaaaacttaagtaactattttgccttacaaaacattaccaaattacgt
aacggtgttttacgcgatttacgcgaaaacatgtttaaaaaaattgtttcgttaccggta
tcgtactattctgaaaaacgaaaaggcgatgtaatggcgcgcatgttaggcgatgtaaac
gaagttcaaaactcattctttttaatattagaattgattgtaaaagaaccgttaaccatt
gctttttcattaatcgccatgttttctatcagctggaaactaaccttatttgtttttatt
ttcatccctatttctgggttaattatcaccaaaataggtaaatcccttaaaagcaaatca
acacgcgcacagcaagaaaatggttatttaatctcgattaccgaagaaacgctttcgggc
ttaaaagtggtaaaaggttacaatgccgaaaagtttttttcagatttattttacaactca
atcaaccgtttatacaaattaacaaacgccattgccaagaaaaataacttagcacaacct
atgagcgaatttatgggtattgttgtaattggtattttattggtttacggaggtaactta
gttttagtagataaatcgttaaacggcgcacaatttattgcttacattggtttagcttac
aacatattaacgccagcaaaagcaatttctaaagcatcgtaccaagtaaaaaatggttta
gcagctgccgaacgtgtttttgaagttttagaagttgaaaacccgattgaagatgcacca
aacgctaaacaaattaccgggtttgaaaaaggcatcgaaattaaaaacgtaacatttggt
tacaacaatgacgaaccggttttaaccaatttctcggtaaacattcctaaaggaaaaacc
gttgccttggttggtcaatccggatctggtaaaagtaccattgcaaaccttttaacgcgt
ttttacgatgtgaacgaaggtgaaatattaatggatggcgaaaatattaaaaacgtaacc
atgcattcgttacgcaatcaaatgggattggtaacgcaagattcggttatgtttaacgga
tcaattgccgataacgtaaaactaggtaaattggatgcaaccgatgaagaagtaattaaa
gcacttaaaattgctaatgcatacgaatttgtgcaagatttacccgaaggtttgcatacc
aacattggtgatgcaggaaacaaaatatcgggtggccaaaaacaacgtatttctattgcg
cgtgcggttttaaaaaatcctccaatcatgattttagacgaggcaacctcagcgcttgat
accgaaagcgaacgtttggttcaggatgcactagaaaaaatgatgcaaaatagaacatca
attgttattgcccatcgtttatcaaccattcaaaaagccgatttaattttagttttgcaa
aaaggtaaaattatagaacaaggcacgcacgaacagcttttagctttaaatggcacttac
agcaaattagtttctttacaatcgttagaagcttaa
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