Flavobacterium agricola: K5I29_02775
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Entry
K5I29_02775 CDS
T09474
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fag
Flavobacterium agricola
Pathway
fag03030
DNA replication
fag03430
Mismatch repair
fag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K5I29_02775
03430 Mismatch repair
K5I29_02775
03440 Homologous recombination
K5I29_02775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fag03032
]
K5I29_02775
03400 DNA repair and recombination proteins [BR:
fag03400
]
K5I29_02775
Enzymes [BR:
fag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K5I29_02775
DNA replication proteins [BR:
fag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K5I29_02775
DNA repair and recombination proteins [BR:
fag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K5I29_02775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
DEDDh_C
DNA_pol_A_exo1
DUF7508
Motif
Other DBs
NCBI-ProteinID:
UYW01860
UniProt:
A0ABY6M2B3
LinkDB
All DBs
Position
complement(567343..568701)
Genome browser
AA seq
452 aa
AA seq
DB search
MYAILDIETTGGQFNEEGITEIAIYKFDGHEVVDQFISLINPEIPIQPFVIKLTGINNAM
LRSAPKFYEVAKRIIEITEGCIVVAHNASFDYRVIRTEFKRLGYDFVRETLCTVDLSKKL
LPEQASYSLGKLVRSLGIPIADRHRASGDAMATVKLFKVLLAKDTNKEILTGLVKSEIDS
GISPKLLDILDKVPSKTGIYYIHNEQGAIIYIAKSKNMKRKVNQHFTQNSKKALRIQKEV
FTITYEETGSELLASLKEVREIEINKPKYNKVLLKSTVPFALYKQKNKDGYYGFRILKKD
KRRKEITCFATLQEGEKFLDYVTEKFQLCKHVNLDVAEHKPCTAYSNKKCLGACLEIENK
KAYNARVEQFIETYNTKHTNFIVIDKGRTIEERSAIWVENKKVLGYCFFNLNHQINKLNI
LKNIITPLDQSNESFNIVESFVRKKELKMIPY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcaattctagacatagaaacaactggcggtcagtttaacgaagaaggaattact
gaaattgctatttataaatttgatggccacgaggtggtagatcagtttattagcttaata
aatcccgaaattccgatacaaccgtttgttattaaacttaccggcattaacaatgccatg
ttacgctcggcgcctaagttttatgaggttgctaaacgtattatagaaattaccgaaggc
tgcatcgtagttgctcacaacgccagttttgattaccgtgttattcgcaccgaatttaaa
cgtttaggttatgattttgtacgcgaaacgctttgtacggtagatttatcaaaaaaatta
ttacccgaacaagcttcgtattctttaggtaagttggtacgcagtttaggtattcctatt
gcagatcgtcatcgcgcaagcggagatgctatggcaaccgttaaactttttaaagtttta
ttagcaaaagacaccaataaagaaattttaactggtttagtaaagtctgaaattgacagc
ggtatttcacccaaattgttagatattttagataaagttccatctaaaacaggtatttat
tacattcataacgaacaaggagcaattatttatattgcaaaaagtaaaaacatgaagcgt
aaggtaaatcagcattttacgcaaaattctaaaaaagcattacgcatccaaaaagaagtt
tttactattacgtacgaagaaacaggaagcgaattgttagcgagcttaaaagaagttcgc
gaaatagaaattaacaaacccaagtataataaggttttattaaaatcaaccgttccgttt
gccctttacaaacagaaaaataaagatggatattatggctttcgcatcttaaaaaaagac
aaacgtcgtaaagaaatcacctgctttgctactctgcaagaaggcgaaaagtttttagat
tacgttaccgaaaaatttcagctttgtaaacatgttaatttagatgttgcagaacacaaa
ccgtgtactgcttattcaaataaaaaatgcttaggtgcttgtttagaaatagaaaataaa
aaagcatataatgcacgtgtagaacaatttattgaaacttataataccaaacacaccaat
tttattgttatagataaaggacgtacgattgaagaaagaagtgctatttgggtggaaaat
aaaaaagttttgggatattgtttttttaatttgaaccatcaaattaacaagctcaatatt
ttaaaaaatattattaccccactcgatcagtccaacgaaagctttaatatcgtagaaagt
tttgtgcgtaaaaaagagttaaaaatgattccttattag
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