Flavobacterium agricola: K5I29_03170
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Entry
K5I29_03170 CDS
T09474
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
fag
Flavobacterium agricola
Brite
KEGG Orthology (KO) [BR:
fag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fag03400
]
K5I29_03170 (sbcD)
DNA repair and recombination proteins [BR:
fag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K5I29_03170 (sbcD)
Archaeal homologous recombinant proteins
K5I29_03170 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
UYW01930
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All DBs
Position
complement(654339..655583)
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AA seq
414 aa
AA seq
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MKILHTADWHLGQTFFDNDRTLEHEAFLNWLFTTIVTKNVDAVLISGDVYDNSNPSNKAI
SMLYQFMQKVSNQLPHVQLLFTGGNHDSPLRLEQPNPLLEHTQIKIVGSSKTNADKTIRY
EDLIFRLKDNNQGPDVLCIAVPFLRLGDYPASENGTYEYQEGLKKYYQQAYEVAKQMATN
NEAIIAMGHLHALGIKINDRDTSERDIIGGIEMISATDFPKELTYVALGHIHKAQQVGGQ
NHIRYCGSPIPLSFAEKNYKHQVLLLDIDTQLNAIESIEVPVTVPLLTIPEKPASFEQVL
FHLDLLQQELAHATVQPYVEVRVDISQMSANYIEEIKQKFNTINAKLVKITAAKPLDKKQ
DATQSFREFEYLDQINPLDFVKKIYSNKAQQPLNASQLEKINLVLTEITKQQAE
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattacatacagccgattggcatttaggacaaactttttttgataacgacaga
actttagaacatgaagcctttttaaactggttatttacaacaattgttactaaaaatgtt
gatgctgttttaattagtggcgatgtgtacgataattcaaacccatctaacaaagccatt
agcatgttgtatcaatttatgcaaaaggtttctaatcaattaccgcacgtacaactattg
ttcacaggcggtaatcacgattcgcctttacgattagaacaacccaatccattattagaa
catactcaaataaaaattgttggaagttctaaaaccaatgctgataaaaccattcgatat
gaagatttaattttcagattgaaagataacaaccaaggcccggatgtactttgcattgca
gttccatttttacgattaggcgattatcctgcaagcgaaaatggcacctacgaatatcag
gaaggtttaaaaaaatactaccaacaagcgtatgaagttgccaaacaaatggcaacgaat
aacgaagctattattgcaatggggcatttacacgcgttaggaattaaaataaacgatagg
gatacgtcagaacgtgatattattggcggaatcgaaatgatttctgctaccgattttcct
aaagaattaacttatgttgctttggggcatattcacaaagcccaacaagttggtggtcaa
aatcacatccgttattgtggcagcccaattccgctatcttttgccgaaaaaaactacaaa
caccaagtacttttattagatattgatacgcaactaaatgctattgaaagtattgaagtt
cctgtaaccgttcctttgctaaccattccagaaaagccagcaagttttgagcaagtactt
tttcatttggatcttttacaacaagaattagctcatgctacggtacaaccttatgtagaa
gttcgtgttgatatttcgcaaatgagcgccaattacatagaagaaattaaacaaaagttt
aataccataaatgccaaattagtaaaaattacagcagcaaaacccttagataaaaaacaa
gatgcaacgcaaagctttcgggaatttgaatatttagatcaaattaatccgctagatttt
gttaaaaaaatttacagcaacaaagcacaacaaccgttaaacgccagccaactcgaaaaa
ataaatttagtactaaccgaaattacaaaacaacaagccgaataa
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