Flavobacterium agricola: K5I29_07565
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Entry
K5I29_07565 CDS
T09474
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fag
Flavobacterium agricola
Brite
KEGG Orthology (KO) [BR:
fag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fag03009
]
K5I29_07565 (rimO)
Enzymes [BR:
fag01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
K5I29_07565 (rimO)
Ribosome biogenesis [BR:
fag03009
]
Prokaryotic type
ribosomal protein modification factors
K5I29_07565 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UYW00419
LinkDB
All DBs
Position
1520692..1522011
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AA seq
439 aa
AA seq
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MRTKSLKKNKINVITLGCSKNVYDSEVLMGQLKASGKDVEHEAPADREGNIIVINTCGFI
NNAKEESVNTILEYVDKKDQGIVDKVFVTGCLSERYRPDLEAEIPNVDQYFGTTDLPLLL
KALGADYKHELLGERLTTTPKNYAYLKIAEGCDRPCSFCAIPIMRGKHVSQPIEKLVKEA
ETLAKNGVKELILIAQDLTYYGLDLYKKRNLAELLENLVKVEGIEWIRLHYAFPTGFPMD
VLDLMEREPKICNYIDIPLQHISDSVLKSMRRGTTYEKTTQLLKDFRKAVPGITIRTTLI
VGYPGETEEDFEILKNWVKEMRFERLGCFAYSHEENTHAYNLEDDVPEEVKQARATEIMD
IQAQISWDLNQEKIGQTFKCIIDRKEGQYFIGRTEFDSPDVDNEVLIDASKFYLKMGEFA
NIKIFDATEFDLYGEPVTE
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaagtctttaaaaaaaaataaaataaacgtaatcactttaggatgctctaaa
aatgtttacgacagcgaagtgctaatggggcagcttaaagctagtggaaaagatgttgaa
catgaagctcctgcagatcgcgaaggcaatatcattgtaataaacacctgcggctttatt
aataatgcaaaagaagaatcggttaacaccattttagaatatgttgataaaaaagatcaa
ggtattgtagacaaagtttttgttaccggatgtttgtctgaacgttacagacctgattta
gaagcagaaattccaaacgtagatcaatattttggtactaccgatttacctttattactt
aaagcacttggtgccgattataaacacgaattacttggtgaacgtttaactacaacacca
aaaaactacgcctatttaaaaattgctgaaggatgtgacagaccgtgctctttctgtgca
attcctattatgcgcggtaaacacgtgtcgcaacctattgaaaaattggttaaagaagcc
gaaactttagctaaaaatggagttaaagaacttattttaattgcgcaagatttaacttat
tacggattagatttatacaaaaaaagaaatttagccgaactgttagaaaacttagtaaaa
gttgaaggaattgaatggattagattgcattacgccttccctaccggttttccaatggat
gtgctagatttaatggagcgcgaaccaaaaatctgtaattatattgacattccgttacaa
cacatttcagacagcgtattaaaatcaatgcgccgcggtacaacttacgaaaaaacaacg
cagctattaaaagattttagaaaagcagttcctggaatcacgatcagaacaacattaatt
gttggttatcctggcgaaacggaagaagattttgaaattttaaaaaactgggttaaagaa
atgcgctttgaacgattaggttgttttgcatattctcatgaagaaaacacgcatgcatat
aaccttgaagatgatgttccggaagaagttaaacaagcgcgtgcaactgaaattatggac
attcaggcacaaatttcgtgggatttaaaccaagaaaaaattggacaaacttttaaatgt
attattgacagaaaggaaggacaatattttattggtagaactgaatttgattcgcccgat
gtagataacgaagttttaattgatgcaagtaagttttatttaaaaatgggtgaatttgct
aacattaaaatatttgatgcaacagaatttgatttatacggagaacccgtaaccgaataa
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