Flavobacterium agricola: K5I29_07700
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Entry
K5I29_07700 CDS
T09474
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
fag
Flavobacterium agricola
Brite
KEGG Orthology (KO) [BR:
fag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fag03032
]
K5I29_07700
03036 Chromosome and associated proteins [BR:
fag03036
]
K5I29_07700
03400 DNA repair and recombination proteins [BR:
fag03400
]
K5I29_07700
DNA replication proteins [BR:
fag03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K5I29_07700
Chromosome and associated proteins [BR:
fag03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
K5I29_07700
DNA repair and recombination proteins [BR:
fag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
K5I29_07700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Myb_DNA-bind_8
DUF6927
Motif
Other DBs
NCBI-ProteinID:
UYW00444
LinkDB
All DBs
Position
1549932..1550207
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSELIDAIAADAGITKAAAKLALESFLKNVGTTLKDGKKISLVGFGSWSVSERAAREG
RNPQTGKTIKIAAKKVVKFKAGAELEAAVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatctgaattaatcgatgctattgctgctgatgcaggaatcactaaagcagct
gctaagttagctctagaatcatttttaaaaaatgtaggaactacgttaaaagacggtaaa
aaaatctcattagtaggttttggatcatggtcagtttctgaaagagctgctagagaaggt
agaaaccctcaaactggtaaaactattaaaattgctgctaaaaaagtagttaaatttaaa
gcaggtgctgaattagaagctgcggtaaacaaataa
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