Flavobacterium agricola: K5I29_08610
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Entry
K5I29_08610 CDS
T09474
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fag
Flavobacterium agricola
Brite
KEGG Orthology (KO) [BR:
fag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fag03032
]
K5I29_08610 (topA)
03400 DNA repair and recombination proteins [BR:
fag03400
]
K5I29_08610 (topA)
Enzymes [BR:
fag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K5I29_08610 (topA)
DNA replication proteins [BR:
fag03032
]
Prokaryotic type
DNA Topoisomerases
K5I29_08610 (topA)
DNA repair and recombination proteins [BR:
fag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K5I29_08610 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Gag_spuma_N
MarR_2
Motif
Other DBs
NCBI-ProteinID:
UYW00600
LinkDB
All DBs
Position
complement(1732607..1735156)
Genome browser
AA seq
849 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGSDFKVESSFGHIADIPANEMGVDIENNFKPTYEVSADK
KALVKKLKQLAKDAEMVWLASDEDREGEAIAWHLAEELNIKPEKRKRIVFHEITKNAILK
AIENPRDIDYNLVNAQQARRVLDRLVGYELSPVLWRKVKRGLSAGRVQSVSVRLIVERER
EIQDFNSVATYNISAEFKTENGKSFKAKLPKSFATQQEAEAFLQANVGSTYKVSDIETKP
AKKSPAAPFTTSTLQQEAARKLGLPVGVTMMLAQRLYEAGLITYMRTDSVNLSNEAMSAA
QAEIIRSYGKEFSKPRNFATKSKGAQEAHEAIRPTDMSKHSVAIDRDQARVYDLIWKRTL
ASQMSDAQLERTNLKVEANNHSDLFTATGEMIKFDGFLRVYLEGHDDEEEQEEGMLPSLK
VNEPLSANYIAATQRFSRPPARYSEAALVKKLEELGIGRPSTYAPTITTIINRNYVEKGT
FEGSERQYNQLILKNNTIATKQLTENTGSDKGKLVPTDIGVIVNDFLVKNFDTILDYNFT
AKVEQDFDEIAEGKENWTNMMHQFYSHFHPKVNDVMDNAERESGERTLGVDPQSGKPVSV
RLGKFGPMAQIGEREDEERKFASLRSDQNIASITLEEALKLFELPKKLGEFESEEVEVNN
GRFGPYVKFGSQFISLPKGMDPVDVSLAMAIEIIKEKQKADAPIATFKGMDVQKGVGRFG
PFLKWNGMFINVNKKYDFDNLSQADIVELIEDKIQKEIDKVIHNWEDEGIRVEKARWGRS
TIISGKVKIELSKDVDAVQLTLDEVKEMIAKKTPEKKTAAKKTTATKAKTTTAKKATTKT
TAKKAAPKK
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatttagtgattgttgagtctcctgctaaggcaaaaacgatagaaaagttt
ctgggtagcgattttaaggtcgaatccagttttggtcatattgctgatattcctgctaac
gaaatgggcgtagatatagaaaataattttaaacctacgtacgaagtttccgcagataaa
aaagcattggttaaaaaacttaaacagttagctaaagatgccgaaatggtttggttagca
tccgatgaggaccgcgaaggtgaagctattgcttggcacctggccgaagaattaaatatt
aaacctgaaaaaagaaaacgcattgtatttcacgaaattactaaaaatgcaattttaaaa
gcgatagaaaatcctcgtgatattgattataatttagttaatgcacaacaagcacgccgt
gtattagaccgtttggtgggctacgaactttcgccggttttatggcgcaaagttaaacgc
ggattatctgccggacgtgtacaatcggtttcggtacgtttaattgttgaacgcgaacgc
gaaatacaagactttaattcggttgcaacctataatatttctgcagaatttaaaactgaa
aacggaaaatcttttaaagcaaaattacctaaatcatttgctacgcaacaagaagctgaa
gcttttttacaagcaaatgtagggtctacttataaggtttcagacatcgaaaccaaaccc
gcaaaaaaatcgccagcagcaccatttacaacttctaccttacaacaagaagctgctcgt
aaattaggattacctgttggggtaaccatgatgttagctcaacgtttatatgaagcaggg
ttaattacttatatgagaaccgatagcgtgaacttatctaatgaagcaatgagcgctgct
caagccgaaattattcgttcatacggtaaagaattttctaaacctcgcaattttgcaacc
aaatctaaaggcgctcaagaagcccacgaagccattcgtccaaccgatatgagtaagcat
tcggtagctattgatcgtgatcaggcacgtgtatacgatttaatttggaaacgtacttta
gcttcgcaaatgagcgacgcgcagttagaacgtaccaatttaaaggttgaagcaaataac
cacagcgatctttttacagcaactggtgaaatgattaagtttgatggctttttacgtgtg
tatttagaagggcacgatgacgaagaagagcaagaagaaggtatgttaccaagcttaaaa
gttaacgaaccgttatcagcaaattacattgcagcaacccaacgtttttctcgtccgcca
gcacgttattcagaagctgctttagttaaaaaattagaagaattaggtatcggacgtccg
tcaacctacgcaccaaccattacaacaattattaaccgtaattatgttgaaaaaggaacg
tttgaaggtagtgaacgtcagtacaaccaactaattcttaaaaataataccattgcaacc
aagcaattaacagaaaatacaggctcggataaaggtaaattagtaccaaccgatattggt
gttatcgtaaacgatttcttggttaaaaatttcgataccattttagattacaactttacc
gcaaaggtagagcaggattttgatgagattgctgaaggtaaagaaaactggaccaatatg
atgcatcaattctattcgcattttcacccaaaagtgaacgatgttatggataatgcagaa
cgcgaatcgggtgaacgtaccttaggtgttgatccgcaatccggaaaacctgtatctgtt
cgtttaggtaaatttggtccaatggctcaaattggagaacgtgaagatgaagaacgtaaa
tttgcaagtttacgttcagatcaaaacatagcaagcattacattagaagaagctttaaaa
ctttttgaattaccaaaaaaactaggcgaatttgaaagtgaagaagttgaagtaaataat
ggccgatttggtccttacgttaaattcgggtctcaatttatttctttgccaaaaggcatg
gatccggttgatgtttcgttagctatggctatcgaaattattaaagaaaaacaaaaagct
gatgcaccaattgcaacctttaaaggtatggatgtgcaaaaaggcgtagggcgtttcggt
ccattcttaaaatggaacggcatgtttattaacgtgaataaaaaatatgattttgataac
ctatctcaagcagatattgtagaattgattgaagataaaattcaaaaagaaatcgataaa
gtaattcacaattgggaagacgaaggtattcgtgtcgaaaaagcacgttggggacgttca
actattattagtggtaaagttaaaatcgaattgtctaaagatgttgatgcagtacaatta
accttagatgaggtaaaagaaatgattgctaaaaaaacgcccgaaaagaaaacggctgct
aaaaaaacaacagcaaccaaagctaaaacaactacggcaaaaaaggcaacaactaaaaca
acagctaaaaaagcggcacccaaaaaataa
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