Flavobacterium agricola: K5I29_08625
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Entry
K5I29_08625 CDS
T09474
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
fag
Flavobacterium agricola
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_2
AAA_5
HTH_50
HTH_28
MCM
Mga
HTH_23
Oxidored_nitro
Mg_chelatase
HTH_30
HTH_11
HTH_29
HTH_17
nSTAND3
HTH_22
HTH_7
HTH_3
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UYW00603
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Position
1737409..1738710
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AA seq
433 aa
AA seq
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MESVQAIKQRFEIIGNDPKLNRALEKAIQVAPTDISVLVTGESGVGKESIPKIIHALSHR
KHGKYIAVNCGAIPEGTIDSELFGHEKGAFTGATTTREGYFEVADGGTIFLDEVGELPLT
TQVRLLRVLENGEFIKVGSSQVQKTNVRIVAATNVKMHEAIEKGKFREDLYYRLSTVEIF
LPPLRERHGDIHLLFRKFASDFANKYKMPPIRLDENAVNYLTNYRWSGNIRQLRNFAEQI
SILETKREVNLETIKHYLPMQGKNLPSVIEHKKADSDFSSEREILYKVLFDMKADLNDLK
KLTLELMQNNNSKNVQENNKSLIQRIYGQENNIDNVVPTHERNKEESFAAIPIVPQNNKA
TTPEIINNYNLDEDEDYLLAETVDEEDSLRLDEKEIELIKKALERNNGKRKAAAEELGIS
ERTLYRKIKQFDL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgttcaagctataaaacaacgattcgaaattattggtaacgaccccaagtta
aatagagcacttgaaaaagccattcaagttgcccctactgacatttcggtactagtaacc
ggagaaagtggagttggtaaagaaagcattcctaaaattatacatgcactatctcacaga
aaacacggcaaatatattgccgtgaactgtggtgcaattccagaaggaaccattgattct
gaattattcggacacgaaaaaggcgcatttaccggagcaaccacaacccgcgaaggttat
tttgaagttgccgatggcggaaccatttttttagatgaagttggtgaattacctttaacc
acccaagttcgcttacttcgcgtacttgaaaatggtgaatttataaaagtaggttcgtca
caagtacaaaaaaccaacgtacgcattgtagccgcaaccaacgtaaaaatgcacgaagct
attgaaaaaggtaagtttcgtgaagatttgtactaccgtttatcaaccgtagaaatattt
ttacctccattacgcgaacgtcatggcgatattcatttgttattccgcaaattcgcatca
gattttgcaaacaaatacaaaatgcctcctattcgtttagacgaaaatgcagtaaattat
ttaaccaattaccgttggagcggtaacattaggcaactacgcaattttgccgagcaaatt
tctattttagaaaccaaacgcgaggtaaatttagaaaccataaaacattatctacccatg
caaggtaaaaacttaccaagcgtgatagaacataaaaaagcagattctgattttagcagc
gagcgcgaaatattatacaaagtgctttttgacatgaaagccgatttaaacgatttaaaa
aaattaacgttagaattgatgcaaaacaacaattctaaaaacgtgcaagaaaataacaaa
tcgttaattcagcgtatttacggtcaagaaaataacatagacaatgtagtaccaacgcac
gaacgcaataaagaagaaagttttgctgccataccaattgtaccacaaaacaacaaagca
actacgccagaaattataaacaattataatttagacgaagatgaagactatttgttagca
gaaaccgttgatgaagaagattctttacgtttagacgaaaaagaaatcgaactaataaaa
aaagctttagaacgcaacaacggcaaacgcaaagcagcagcagaagaattaggtatttct
gaacgaaccttatatcgaaaaattaaacaattcgatttatag
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