Flavobacterium agricola: K5I29_10065
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Entry
K5I29_10065 CDS
T09474
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
fag
Flavobacterium agricola
Brite
KEGG Orthology (KO) [BR:
fag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fag03032
]
K5I29_10065
03036 Chromosome and associated proteins [BR:
fag03036
]
K5I29_10065
03400 DNA repair and recombination proteins [BR:
fag03400
]
K5I29_10065
DNA replication proteins [BR:
fag03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K5I29_10065
Chromosome and associated proteins [BR:
fag03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
K5I29_10065
DNA repair and recombination proteins [BR:
fag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
K5I29_10065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
UYW00845
LinkDB
All DBs
Position
2016213..2016509
Genome browser
AA seq
98 aa
AA seq
DB search
MTKADIVAKISEKLGLEKGDVQATVESFMEEVKTSLESGENVYLRGFGSFIIKTRAEKTG
RNISKNTTIKIPAHNIPAFKPAKVFVDGVKSNTEVKNN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagcagacatcgtagcgaagatttcggaaaagttaggtcttgaaaaaggcgac
gttcaagctacagtagagtctttcatggaagaggtaaaaacttcacttgaatctggagaa
aatgtatatctaagaggttttggtagctttattatcaaaacaagagctgaaaaaacaggg
agaaatatttcaaaaaacacaacgattaaaattcctgctcacaacataccagcatttaaa
ccagctaaagtatttgttgatggagtaaaatcgaatacagaagtaaaaaataactaa
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