Flavobacterium agricola: K5I29_12570
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Entry
K5I29_12570 CDS
T09474
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fag
Flavobacterium agricola
Brite
KEGG Orthology (KO) [BR:
fag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fag03016
]
K5I29_12570 (truB)
Enzymes [BR:
fag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K5I29_12570 (truB)
Transfer RNA biogenesis [BR:
fag03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K5I29_12570 (truB)
Prokaryotic type
K5I29_12570 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UYW01265
LinkDB
All DBs
Position
complement(2553971..2554690)
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AA seq
239 aa
AA seq
DB search
MTKLSPEEFQEGQILLLDKPLTWSSFQAVNKVKYALIKNLGLPKKFKIGHAGTLDPLASG
LLIICTGKFTKRISELQGQIKEYTGTITVGATTPSYDLETEINETFATEHITDELIEQAR
QTFLGEIDQFPPVFSAIKKDGKRLYEHARAGEEIEVAARKVEIMTFEITRVALPEIDFRV
VCSKGTYIRSLAYDFGKALQSGAHLTALRRTKIGAYSVNDAVHPLDFEKTYNPNYKEAE
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaattatctccagaagaatttcaagaaggtcaaattttattactcgacaagccc
ttaacttggagttcttttcaggctgttaacaaagtaaaatatgccttaattaaaaactta
ggattacctaaaaaatttaaaattgggcacgccggaacgttagatccgttagcatcaggt
ttattaattatttgcacgggcaaattcaccaaacgaatttctgaattacaagggcaaatt
aaagaatataccggcaccattaccgttggtgcaaccacaccatcgtacgatttagaaacc
gaaataaacgaaacttttgcaaccgaacatattacagatgaattgattgaacaagcacgc
caaacgtttcttggagaaatcgatcagtttccacctgtattttctgccattaaaaaagat
ggcaaacgtttgtacgaacatgctcgcgcaggagaagaaattgaagttgcagcacgcaaa
gttgaaattatgactttcgaaattacccgcgttgccttacctgaaatagattttagagta
gtttgcagcaaaggaacttatattcgatcattagcttacgatttcggaaaagctttacaa
tcgggagcacatttaactgctttacgccgaacaaaaattggagcgtattcggttaacgat
gccgtgcatcctcttgattttgaaaaaacatataaccccaattataaagaagctgaataa
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