Flavobacterium agricola: K5I29_12750
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Entry
K5I29_12750 CDS
T09474
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fag
Flavobacterium agricola
Pathway
fag03030
DNA replication
fag03430
Mismatch repair
fag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K5I29_12750 (dnaE)
03430 Mismatch repair
K5I29_12750 (dnaE)
03440 Homologous recombination
K5I29_12750 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fag03032
]
K5I29_12750 (dnaE)
03400 DNA repair and recombination proteins [BR:
fag03400
]
K5I29_12750 (dnaE)
Enzymes [BR:
fag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K5I29_12750 (dnaE)
DNA replication proteins [BR:
fag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K5I29_12750 (dnaE)
DNA repair and recombination proteins [BR:
fag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K5I29_12750 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
Intimin_C
Beta-prop_EMC1_N
Motif
Other DBs
NCBI-ProteinID:
UYW01299
UniProt:
A0ABY6M0V8
LinkDB
All DBs
Position
complement(2588835..2593340)
Genome browser
AA seq
1501 aa
AA seq
DB search
MYLIFDTETTGLPRDYNAPITDTDNWPRCIQIAWQLHDEMGNLIEHQDYLVQPNGFDIPY
DSERIHGISTALAQQKGAALQQVLEHFNIALSKTKFVVGQNVGFDLKIMGAEFYRANLDT
DLNELPVLDTCTETTANLLKLPGGRGGRFKLPTLTELHQFLFNQPFAEAHNATADVEATT
RCFFELIRKDVFTADELLEDASYLKQFKTQNPKPFELIGLKHINLKKASEEIRKEIEALQ
KKKEPSQTTKVDLSTHAFAHLHNHTQFSVLQSTIDIGALVKQAAADKMPAIAMTDHGNMM
GAFKFVSAILGHNKSVANSIKTAKENGEEPTETEIKPIVGCEFNICENHKDKTKKDNGYQ
VVLLAKTKKGYHNLAKLSSIAFIDGFYYVPRIDKEILLQYKEDVIVLTGNLMGEIPNKIL
NTGLKQAEEALLWWKTHFQDDLYVEIMRHNQEDENRANISLIELAHKHQVKLVATNNTYY
MNKSDANAHDILLCVKDGEKQATPIGKGRGYRYGLPNSEYYFKTQDEMKALFADIPEAII
NIQEIVDKIEVYDLARDILLPKFDIPEEFVDPLDDQDGGKRGENAYLRYLTYKGAEKRYA
EITDEIKERLDFELQIIANSGYPGYFLIVQDFIAAARSMGVSVGPGRGSAAGSAVAYCLW
ITNLDPIQYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMDYVINKYGANQVAQIITYGK
MATKSSIKDAARVLDLPLYESERIAKLIPTMMPGKWNLARFLKESEDEIKKAVRSDEFEP
IKELINIANQGDLAAETIQQAKIIEGSMRNTGIHACGVIITPDDITNFVPVQTAKDSDLY
VTQFDNSVAESAGLLKMDFLGLKTLTLIKDTCAIIKQRTGKVIDPETIPIDDEKTYQLFQ
RGETVGVFQYESAGMQKYMRELKPTVFGDLIAMNALYRPGPLEYIPSFIRRKNGEEPITY
DLEACEEYLKETYGITVYQEQVMLLSQKLADFTKGEADVLRKAMGKKQKDVLDKMKPKFV
EQASAKGHDANILEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLS
NNMNDIKSVTFFMEECKRMGLKVLGPDVNESHYKFAVNDNYEIRFGMGAVKGVGEGAVNT
IIQNRQDGDYKSIFDLAKRIDLRAANKKAFENLALAGGFDCFTDTHRAQYFHTAEDTITF
LEKAIKYGAKHQESANSAQVSLFGEMSDVQIPEPVIPQCEEWGAMEKLAKEKEVVGIYIS
GHPLDDYKHALKYFAHNRFEELKDIENLIGKNLSFGGIITDVQHRTAKNGKGWATFIVEG
YDENYEFRIFDEEYLKLRHFLLLNQFIYLRINIKEGWVNKTTGKKSDPKIQFVNMMLLQD
VLSHFAKKINIVLSIFDFDEQKIMELNQLFSIHPGNTPVSFEVLEIEKIKRLVETPLESE
TNLDEELAENGEEQIQAVLTEEVEEFKIVTKLAMDSRKLKVDINPQFLQDLEQLQIPFKV
S
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatttttgatacagaaacaacgggattacctcgcgattataatgcccctatt
acagatacagacaattggccaagatgcatacaaattgcttggcaattgcatgacgaaatg
ggtaatttaattgagcatcaggattatttagtacaacctaatggttttgacattccgtat
gattctgaaagaattcacggtatttcaacagctttggcacaacaaaaaggagcagcttta
caacaagttttagagcattttaatattgccttatctaaaaccaaatttgtagttggtcaa
aatgttggcttcgatttaaaaattatgggtgccgaattttaccgcgccaatttagatact
gatttaaacgaacttcctgttttagatacctgtaccgaaacaacagctaatttattaaaa
ctacctggaggacgtggtggacgttttaaattaccaactttaaccgagttgcatcaattt
ttattcaatcagccatttgctgaagcccacaatgcaacagccgatgttgaggcaactacg
cgttgtttttttgaattgattagaaaagatgtttttacagctgacgaattactagaagat
gcatcctatttaaaacaatttaaaacccaaaacccaaaaccttttgagttaattggctta
aagcacatcaatcttaaaaaagcttcagaagaaattagaaaagaaattgaagctttacaa
aaaaagaaagaaccaagccaaactacaaaagttgatttaagcacacatgcttttgcgcac
ttgcacaaccacacccaattttcggttttacaatcaaccattgatattggtgcgttggta
aaacaagcagctgccgataaaatgccagcaattgccatgaccgatcatggtaacatgatg
ggagcttttaaatttgtaagcgccattttaggacataacaaatcggtagcaaatagcatt
aaaacagctaaagaaaatggtgaagaaccaaccgaaaccgaaataaaacccattgtaggt
tgcgaatttaatatatgcgaaaaccataaagataaaaccaaaaaagataacgggtaccaa
gttgttttgcttgctaaaaccaaaaaaggctaccataacttagccaagctttcatccatt
gcattcattgacggtttttattacgttccgcgtattgataaagaaattttattgcagtac
aaagaagatgtaattgtactaaccggaaacttaatgggtgaaattccgaataaaatttta
aacaccggtttaaaacaagctgaagaagctttattgtggtggaaaacgcattttcaagat
gatttatatgtcgaaattatgcgccacaaccaagaagatgaaaatcgtgccaacataagt
ttaatcgaattggcgcacaaacatcaggttaaattggtggcaacaaacaatacgtattac
atgaacaaatctgacgccaatgcgcacgatattttgctttgtgtaaaagacggagaaaaa
caagcaacgccaattggcaaaggccgaggttaccgttacggcttaccaaattctgaatat
tattttaaaacgcaagacgaaatgaaagcactatttgccgacattccagaagctataata
aatattcaggaaattgtagataaaattgaagtttacgatttagctcgtgatattttatta
ccaaaatttgatattcctgaagaatttgttgacccgttagacgatcaagatggtggtaaa
cgtggtgaaaatgcatatttacgttatttaacctataaaggagccgaaaaaagatacgca
gaaattaccgacgaaattaaagaacgtttagattttgaattgcaaattattgccaattca
ggctacccgggctatttcttgatcgtgcaagattttattgctgccgcacgcagcatgggc
gtttctgttggtccgggccgtggctccgcagcaggctctgccgttgcttattgtttatgg
attaccaatttagatcctattcagtacgatttactttttgagcgttttttaaatcccgat
cgtgtttccatgcccgatattgatattgattttgatgatgaaggacgcggacgcgttatg
gattatgtaattaataaatacggagcaaaccaagttgcgcaaattattacctacggtaaa
atggcaaccaaatcatctattaaagatgcggcgcgcgtgttagatttaccgctatacgaa
tccgaaagaattgccaagctaatcccgaccatgatgccggggaaatggaatttggctcgc
tttttaaaagaatctgaagatgaaattaaaaaagcagttcgctcggacgaatttgaaccg
attaaagaacttatcaatattgccaatcaaggcgatttagcagccgaaaccattcagcaa
gcaaaaatcatcgaaggttcgatgcgtaataccgggattcacgcttgtggtgttattatt
actccagacgatattaccaatttcgttcctgtacaaaccgcaaaagattccgatttatat
gttacgcagtttgataactccgttgccgaatcggcagggttattaaaaatggacttttta
ggactaaaaactttaaccttaattaaagatacgtgcgccattattaagcaacgcacgggt
aaagtaattgatccagaaaccattccaattgatgatgaaaaaacataccaacttttccaa
cgcggagaaaccgttggagtttttcagtatgaaagtgccggaatgcaaaaatacatgcgc
gaattaaaacctaccgtttttggagatctaattgccatgaatgccctatatcgtccaggc
ccgttagaatatatcccttcttttatccgtcgtaaaaatggtgaagaacctattacgtac
gatttagaagcttgcgaagaatatttaaaagaaacctacggaattacggtataccaagaa
caggtaatgcttttgtctcaaaaactggctgattttaccaaaggtgaagccgacgtttta
cgtaaagccatgggtaaaaagcaaaaggatgtactagataaaatgaaacccaagtttgta
gaacaagcatcggccaaaggccatgatgcaaacattttagaaaaaatttggaaagactgg
gaagcttttgcatcatacgcattcaacaaatcgcactcaacctgttatgcttggattgca
taccaaactgcttatttaaaagcacattatccggccgaatatatggctgcggttctttct
aacaacatgaacgatattaaatcggttacgttttttatggaagaatgtaaacgcatggga
ttaaaagttttaggaccagatgtaaacgaatcacattataaatttgccgttaacgataat
tacgaaattcgttttggtatgggagctgtaaaaggtgtgggcgaaggtgcagtgaacacc
attattcaaaaccgacaagacggtgattataaatcaatttttgatttagctaaacgaata
gatttacgtgcagccaacaaaaaagcctttgaaaacttagcgctagctggcggatttgat
tgttttacagatacgcaccgtgcgcaatattttcatacagcagaagataccattaccttt
ttagaaaaggcaattaaatatggagccaaacatcaggaaagtgctaattcagcacaagta
agtttgtttggagaaatgtcggatgtacaaattcctgaacctgtaattccgcaatgcgaa
gaatggggagcgatggaaaaacttgccaaagaaaaagaagttgttggtatttacatttca
gggcatccattagatgattataaacatgcactaaaatattttgcacacaaccgatttgaa
gaactaaaagatatagaaaacctaattggtaaaaacctttcttttggcggtattattacc
gatgtacagcatcgtactgctaaaaatggcaaaggttgggcaacttttatagttgaaggt
tatgatgaaaattatgagtttagaatttttgatgaagaatatttaaagctgcgccatttt
ttattgttaaaccaatttatttacttacgcatcaatattaaagaaggttgggtaaataaa
acaaccggtaaaaaatctgatcctaaaattcagtttgtaaacatgatgttgttgcaagat
gttttaagtcattttgccaaaaaaataaacattgtactttctatttttgattttgatgaa
caaaaaattatggaattaaaccaattatttagcattcatccgggaaatacgccggtaagt
tttgaggttttagaaattgaaaaaataaaacgtttagttgaaacgcctttagaaagcgaa
actaatttagacgaggaattagccgaaaatggtgaagagcaaatacaagcggtattaaca
gaagaagttgaagaatttaaaattgtaaccaaacttgccatggatagccgcaagttaaaa
gttgatattaatccgcaatttttgcaagatttagagcaattacaaattccttttaaagtt
tcttaa
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integrated database retrieval system
