Flavobacterium agricola: K5I29_13015
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Entry
K5I29_13015 CDS
T09474
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
fag
Flavobacterium agricola
Pathway
fag00550
Peptidoglycan biosynthesis
fag01100
Metabolic pathways
fag01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
fag00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K5I29_13015 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K5I29_13015 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fag01011
]
K5I29_13015 (mrdA)
Enzymes [BR:
fag01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
K5I29_13015 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
fag01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
K5I29_13015 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
dCache_1
Motif
Other DBs
NCBI-ProteinID:
UYW02660
LinkDB
All DBs
Position
complement(2642024..2643886)
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AA seq
620 aa
AA seq
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MRKGLLPAIITLVTLVILGRLFYLQVIDDSFEKKSENNAIKIVYEYPERGYIYDRNGKLI
VANQPSYDIMVIPREVKNIDTLELCHLLDITIDDFNRILNKAKVYSPRLPSIFLPQLNKV
EYAAFQEKIRKFEGFYIQKRALRDYQVNAAANVFGYIAQVNDKIIKENPYYKSGDLIGMQ
GVEKTYEDVLRGVKGVKYRQRDKFNKDIGSYKNGIYDTTAVQGKDITISLDIDLQKYGEE
LMVNKRGGIVALEPSTGEILALVTAPNYDPALLVGRQRSRNYTKLWNDTIGMPLYDRGLL
AEYPPGSPFKILTALIGLQENVVDERTTFMCNHGFFYGKGAFMKCHDSGAIDLHRAIYKS
CNTYFANTFKLVVDKHGAKEGVNTWANHLKSFGLGQFMGYDLPAGRKGHIPTSDYYDRWY
PSGGWRSTTVISNSIGQGEVLMTPIQLANMMATVANRGHYYTPHIIKKIENQEIDKKFTT
KHQTTVDPIHFEPIVAGLADVYNVGTARSLKTPDIQMAGKTGTVENFTKINGKRVQLTDH
SVFVAFAPVDNPKIAIAVFVENGYWGSRYAGPIATLMVEKYLRGSRDSIKRKDLEKRMLN
ASLQFEYDKPVSNQPFVINR
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atcagaaaagggctacttcccgcaattataaccttagtaaccttagtgattttaggtaga
ttgttttatttgcaagttatagacgattctttcgagaaaaaatcagaaaacaatgcaata
aaaatagtttacgaatatcctgagcgtgggtacatttatgaccgaaacggaaagttgatt
gttgccaatcaaccttcttatgatattatggttattccgcgagaagtaaaaaatattgat
accctagaactttgccatttattagatattaccattgacgattttaatcgcatcttaaac
aaagcaaaagtttacagcccacgcctaccttctatttttttaccacaattaaacaaagta
gaatacgcagcatttcaagaaaaaataagaaagtttgaaggtttttatattcaaaaaaga
gctttgcgcgattaccaagtaaacgcagcagcaaacgtttttggttatattgcccaagta
aacgacaaaataattaaagaaaatccgtactataaaagtggggatttaattggaatgcaa
ggtgttgaaaaaacgtacgaagatgttttacgtggagtaaaaggcgtaaaatacagacag
cgtgataagttcaacaaagatatcggatcatacaaaaatggtatttacgataccaccgct
gtacaaggtaaagatattaccataagtttggacatcgatttacaaaaatacggtgaagaa
ttaatggtgaataaacgtggtggaattgttgctttagaacctagcactggcgaaatttta
gctttagtaaccgcaccaaactacgatccggcattattggttggtagacaacgttctaga
aattacaccaaattatggaacgataccattggtatgccattatacgaccgaggtttgtta
gccgagtatcctccgggatctccatttaaaattcttacagcattaatcgggttgcaagaa
aatgttgtggacgaacgcactacatttatgtgcaaccatggctttttttacggtaaaggt
gcttttatgaaatgccacgattcaggggctatcgatttacatcgtgccatttacaaatca
tgtaacacctattttgcaaacacatttaagttagttgtagataaacacggcgcaaaagaa
ggcgttaatacctgggcaaatcatttaaaaagctttggtttaggtcaatttatgggatac
gatttacctgcaggacgaaaaggacatattccaacttcagattattacgatcgttggtat
ccaagcggcggatggcgctctacaaccgtaatttcaaattcaattggacagggagaagtt
ttaatgactccaattcaattagctaacatgatggcaacggttgcaaacagagggcattat
tacacgcctcatataattaaaaaaatcgaaaatcaagaaatagataaaaagtttacaacc
aaacatcaaacaacggttgatcctatacattttgaacctattgtagctggtttagccgat
gtatataacgtaggaacagcacgttcgttaaaaacgccagacatacaaatggctggtaaa
accggaacggtagaaaactttacaaaaattaatggtaaacgcgtacaattaaccgatcac
tccgtatttgttgcttttgctccggtagataatcctaaaattgcaattgcagtttttgtt
gaaaacggatattggggaagccgttatgcaggtcctattgcaactctaatggttgaaaaa
tacttgcgtggcagccgcgacagcattaaacgtaaagatttagaaaaaagaatgctaaat
gcaagtttacaatttgaatatgataaacccgttagcaaccaaccttttgtaattaataga
taa
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