KEGG   Faecalibacterium wellingii: MTP37_09085
Entry
MTP37_09085       CDS       T10369                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
fah  Faecalibacterium wellingii
Pathway
fah03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fah00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MTP37_09085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fah03019]
    MTP37_09085
Messenger RNA biogenesis [BR:fah03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MTP37_09085
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: UQK55789
LinkDB
Position
complement(1910346..1912172)
AA seq 608 aa
MAQSKENTNVSARGKAAAANQNAGAPAAQTGEKRPRTTRRPYYNRRPRRPQQPREAAVPI
HIYPLGGLGEVGKNMTVYECNGDMIIVDCGLVFPDSDMYGVDMVIPDFTFVVQNKDKIKG
LLITHGHEDHIGSIPYLLQKFDLPIYGTRLTCGLIRNKLEEFGLAGKTKFVEITPRQKIR
LGCFTIEPIHVNHSIPDSVAFAIDSPAGTIIQTGDFKIDYTPLACGVTDLSTLAEYGQRG
VLALLSDSTNSERPGFTATEQKVAAGVRNLFARARNKRIIIATFASNIYRVQQIIDLAVE
DGRKVAFSGRSMVNNTAMAQELGYMHIPEGTLISVDELNQYPSEQVVLITTGSQGEPLSA
LSRMASCSHRQVRVGPGDFIIISANPIPGNEKSVTKIVNGLLLLGAEVIYESMYDVHVSG
HACQEEQKLMLTLTKPKYFLPVHGEYKQLKKHALTAASLGIPTSNILIAENGSNVILSQD
EMKLGEPVTAGAVMVDGLGVGDVGNVVLRDRKHLSEDGLVIIVATVDSKTGKVLAGPDLV
SRGFVYVRENESLMDGAQSIVENALDRCVDEHVRDWNSVKTRVREALSSYIYRRTKRSPM
ILPILMEV
NT seq 1827 nt   +upstreamnt  +downstreamnt
atggcacagtcgaaagaaaataccaatgtttccgcacgcggcaaggccgcagcagcgaat
cagaatgcgggcgcacctgctgcgcagacgggcgaaaagcgcccccgcaccacccgtcgt
ccttattataaccgtcggccccgccgcccgcagcagcccagagaggccgctgtgcccatc
cacatctatccgctgggcggtctgggtgaagtgggcaagaacatgaccgtctacgagtgc
aacggcgatatgatcatcgtggactgcggtctggtgttcccggacagcgacatgtacggc
gtggatatggtcatcccggacttcacctttgtggtgcagaacaaggataagatcaagggc
ctgctcatcacccacggccacgaagaccacatcggcagcatcccgtatctgctgcagaaa
tttgatctgcccatctatggcacccgcctgacctgcggcctgatccgcaacaagctggaa
gagttcggtctggcaggcaagaccaagtttgtggagatcacccccagacagaagatcagg
ctgggctgctttaccattgagcccatccatgtgaaccactccatcccggactcagtggcc
tttgccatcgacagcccggcgggcaccatcatccagaccggcgacttcaagatcgattat
accccgctggcctgcggtgtcaccgacctgtccacactggccgagtacggtcagcgcggc
gtgctggccctgctgagcgattccaccaactccgagcgcccgggctttaccgccaccgag
cagaaggtggctgcaggcgtgcgcaatctgttcgcccgtgcccgcaacaagcggatcatc
attgccacctttgcttccaacatctatcgcgtgcagcagatcatcgatctggctgtggag
gatggccgcaaggtggccttcagtggccgcagcatggtgaacaacaccgccatggcacag
gagctgggctatatgcacatcccggagggcaccctcatcagcgtggatgagctgaaccag
tatccctcggagcaggtagtgctcattaccaccggcagtcagggcgaacccctgagcgcc
ctttcccgcatggcgtcctgcagccaccgtcaggtgcgggtgggccccggcgatttcatt
atcatttcggcaaatcccatccccggcaacgagaagagcgtgaccaagatcgtcaatggg
ctgttgctgctgggggcagaggtcatctacgagagcatgtacgatgtgcacgtttccggc
cacgcctgtcaggaagagcagaagctcatgctcaccctgacgaagcccaagtatttcctg
ccggtgcacggcgagtacaagcagctcaaaaagcatgccctcaccgctgcaagcctcggc
atccccaccagcaacatcctcattgcggagaatggctccaacgtcatcctcagtcaggat
gagatgaagctgggcgagccggtgacggccggtgccgtcatggtggacggtctgggcgtg
ggcgatgtgggaaatgtagtcctgcgcgaccgcaagcacctgtccgaggacggtctggtg
atcattgtggccaccgtggacagcaagaccggcaaagtgctggccggccccgaccttgtg
agccgcggctttgtgtatgtgcgcgagaacgagagcctgatggacggtgcacagagcatc
gtggaaaatgcgctggaccgctgcgtggacgagcatgtgcgcgactggaacagcgtcaag
acccgtgtgcgcgaggcactgagcagctatatctatcggcgcaccaagcgcagcccgatg
atcctccccatcctgatggaggtctga

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