Faecalibacterium wellingii: MTP37_09085
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Entry
MTP37_09085 CDS
T10369
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
fah Faecalibacterium wellingii
Pathway
fah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTP37_09085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fah03019
]
MTP37_09085
Messenger RNA biogenesis [BR:
fah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MTP37_09085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
UQK55789
LinkDB
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Position
complement(1910346..1912172)
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AA seq
608 aa
AA seq
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MAQSKENTNVSARGKAAAANQNAGAPAAQTGEKRPRTTRRPYYNRRPRRPQQPREAAVPI
HIYPLGGLGEVGKNMTVYECNGDMIIVDCGLVFPDSDMYGVDMVIPDFTFVVQNKDKIKG
LLITHGHEDHIGSIPYLLQKFDLPIYGTRLTCGLIRNKLEEFGLAGKTKFVEITPRQKIR
LGCFTIEPIHVNHSIPDSVAFAIDSPAGTIIQTGDFKIDYTPLACGVTDLSTLAEYGQRG
VLALLSDSTNSERPGFTATEQKVAAGVRNLFARARNKRIIIATFASNIYRVQQIIDLAVE
DGRKVAFSGRSMVNNTAMAQELGYMHIPEGTLISVDELNQYPSEQVVLITTGSQGEPLSA
LSRMASCSHRQVRVGPGDFIIISANPIPGNEKSVTKIVNGLLLLGAEVIYESMYDVHVSG
HACQEEQKLMLTLTKPKYFLPVHGEYKQLKKHALTAASLGIPTSNILIAENGSNVILSQD
EMKLGEPVTAGAVMVDGLGVGDVGNVVLRDRKHLSEDGLVIIVATVDSKTGKVLAGPDLV
SRGFVYVRENESLMDGAQSIVENALDRCVDEHVRDWNSVKTRVREALSSYIYRRTKRSPM
ILPILMEV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcgaaagaaaataccaatgtttccgcacgcggcaaggccgcagcagcgaat
cagaatgcgggcgcacctgctgcgcagacgggcgaaaagcgcccccgcaccacccgtcgt
ccttattataaccgtcggccccgccgcccgcagcagcccagagaggccgctgtgcccatc
cacatctatccgctgggcggtctgggtgaagtgggcaagaacatgaccgtctacgagtgc
aacggcgatatgatcatcgtggactgcggtctggtgttcccggacagcgacatgtacggc
gtggatatggtcatcccggacttcacctttgtggtgcagaacaaggataagatcaagggc
ctgctcatcacccacggccacgaagaccacatcggcagcatcccgtatctgctgcagaaa
tttgatctgcccatctatggcacccgcctgacctgcggcctgatccgcaacaagctggaa
gagttcggtctggcaggcaagaccaagtttgtggagatcacccccagacagaagatcagg
ctgggctgctttaccattgagcccatccatgtgaaccactccatcccggactcagtggcc
tttgccatcgacagcccggcgggcaccatcatccagaccggcgacttcaagatcgattat
accccgctggcctgcggtgtcaccgacctgtccacactggccgagtacggtcagcgcggc
gtgctggccctgctgagcgattccaccaactccgagcgcccgggctttaccgccaccgag
cagaaggtggctgcaggcgtgcgcaatctgttcgcccgtgcccgcaacaagcggatcatc
attgccacctttgcttccaacatctatcgcgtgcagcagatcatcgatctggctgtggag
gatggccgcaaggtggccttcagtggccgcagcatggtgaacaacaccgccatggcacag
gagctgggctatatgcacatcccggagggcaccctcatcagcgtggatgagctgaaccag
tatccctcggagcaggtagtgctcattaccaccggcagtcagggcgaacccctgagcgcc
ctttcccgcatggcgtcctgcagccaccgtcaggtgcgggtgggccccggcgatttcatt
atcatttcggcaaatcccatccccggcaacgagaagagcgtgaccaagatcgtcaatggg
ctgttgctgctgggggcagaggtcatctacgagagcatgtacgatgtgcacgtttccggc
cacgcctgtcaggaagagcagaagctcatgctcaccctgacgaagcccaagtatttcctg
ccggtgcacggcgagtacaagcagctcaaaaagcatgccctcaccgctgcaagcctcggc
atccccaccagcaacatcctcattgcggagaatggctccaacgtcatcctcagtcaggat
gagatgaagctgggcgagccggtgacggccggtgccgtcatggtggacggtctgggcgtg
ggcgatgtgggaaatgtagtcctgcgcgaccgcaagcacctgtccgaggacggtctggtg
atcattgtggccaccgtggacagcaagaccggcaaagtgctggccggccccgaccttgtg
agccgcggctttgtgtatgtgcgcgagaacgagagcctgatggacggtgcacagagcatc
gtggaaaatgcgctggaccgctgcgtggacgagcatgtgcgcgactggaacagcgtcaag
acccgtgtgcgcgaggcactgagcagctatatctatcggcgcaccaagcgcagcccgatg
atcctccccatcctgatggaggtctga
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