Faecalibacterium wellingii: MTP37_09820
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Entry
MTP37_09820 CDS
T10369
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
fah Faecalibacterium wellingii
Brite
KEGG Orthology (KO) [BR:
fah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fah03016
]
MTP37_09820
Enzymes [BR:
fah01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MTP37_09820
Transfer RNA biogenesis [BR:
fah03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MTP37_09820
Prokaryotic type
tRNA splicing ligases
MTP37_09820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
ELFV_dehydrog_N
Motif
Other DBs
NCBI-ProteinID:
UQK55928
LinkDB
All DBs
Position
complement(2058422..2059531)
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AA seq
369 aa
AA seq
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MITIQNTYNSALVYAETLDSGAEGLIRALCGSLISKGSSIRIMPDVHAGKGCAVGTTMTI
KDCVAPGLVGVDIGCGMLAVKFHAKRLELQKLDKLIRDKIPAGKQVRSVPHHFAEQAHLD
ELLCLRHVQKDKALCAIGTLGGGNHFIEVDKAADGSYWLIIHSGSRRLGVEVASFYQSEA
FQQCPEGTPFELAYATESLMDDYLHDMKITQAFAELNRRAIVNDIVKSMKLDVEETISTI
HNYIDLDSMILRKGAVSAKAGEKLVIPMNMRDGCLLCIGKGNLEWNESAPHGAGRLMSRA
DARNSFTLSQYKKEMQGVYTSSVNRNTLDESPMAYKPMETILRQVEPTVEIVERTKPIYN
FKASEEIAK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
ttgattacaatacaaaatacttataattctgcgctggtatatgcagagactttggattcc
ggtgcagagggtttgattcgtgcactgtgcggcagtctaatctcaaaaggcagcagcatc
cgcattatgccggatgttcacgctggaaaaggctgtgcagtcggcactacaatgaccatc
aaggactgtgtggctcccggtctggtaggcgtggatattggctgcggaatgctggcagtc
aagttccatgctaaacgtctggaactgcaaaagctggataaattgattcgcgataaaatt
ccagccggaaaacaggtgcgctccgtgccgcatcattttgcagaacaggcacacttggac
gagctgctttgtctgcgtcatgtccagaaggataaggctctttgcgctataggcacattg
ggcggcggcaaccattttatcgaggttgataaggcggcggatggctcatactggctcatt
atccattccggcagtcggcggcttggtgtggaagtggcatcgttttaccagagcgaagca
tttcaacagtgcccggaaggcacaccttttgagctggcctatgctacggaaagcctgatg
gacgattatctgcacgacatgaaaatcacgcaggcgtttgcggaactgaaccgcagagcg
attgtaaatgatattgtgaaaagcatgaagctggacgtggaagaaacaatttctaccatc
cataactacattgatctggattccatgattctgcgcaagggtgcagtttccgcaaaggcg
ggcgaaaaactcgtgatcccgatgaatatgcgggatggttgtctactttgcattggaaag
ggcaatctggaatggaacgaatcggctccccacggtgcaggccgcctgatgagccgtgca
gatgcacgaaacagctttacactgtcacagtacaaaaaagaaatgcagggtgtttatacc
agctctgtcaatcggaacacactggacgaaagcccaatggcctataagccgatggaaact
attctccggcaggttgaacctactgtggaaatcgtagagaggacaaagcctatctacaac
tttaaggcaagtgaggaaattgcaaaatga
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