Faecalibacterium wellingii: MTP37_11695
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Entry
MTP37_11695 CDS
T10369
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
fah Faecalibacterium wellingii
Pathway
fah03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MTP37_11695 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fah03400
]
MTP37_11695 (mfd)
Enzymes [BR:
fah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MTP37_11695 (mfd)
DNA repair and recombination proteins [BR:
fah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
MTP37_11695 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
UvrB_inter
TRCF
CarD_TRCF_RID
Helicase_C
UB2H
SNF2-rel_dom
Cas3-like_C_2
AAA_25
RecG_dom3_C
Motif
Other DBs
NCBI-ProteinID:
UQK56282
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All DBs
Position
2484921..2488406
Genome browser
AA seq
1161 aa
AA seq
DB search
MYEALLKATPEYQKIAASFAKPGPAALFGLPPAGRALLYAALQKDLGRVLCIVTPGEAEA
THFADDLKALGLSAAVFPPRDFMLRPVEGAGREYEYRRLSVLGSLAGGRLNAVCVPAEAL
LQYTVPRDEFLKNTLTLKPGMVYNREGLVARLFAAGYVRRSQVDGPGQFSVRGDIVDIYA
PDMRQPARVEYWDDEIDSISSFDLLTQRRDSALDKIYLSPAREVLFGDTAETAEALRAAI
KKARGRHRTALEKATEADLAQLDSGLMPEAMDKYYGLRYPDPATLLDHLDTPLFILDEVG
GIRDAQKATEFRRSEELTGLLEEGVLCPGLDVLYQTMDDLAASAQKQSTLLCENFLRGMN
EFKLKDLINAEAFAAPNWNGDLASLREDLDPLIAQGYAVTLFSGTPKGAAALTRDLADKG
YSVSMSRDVRPTKGIVQVLPGHLTAGCTFPFAHAAVLSSRRHGLEEETAAETKKRKKNKN
ALSSLSDIKPGDYVVHQSHGIGMYAGIQRLEVQGATKDYLKVQYSGSDVLYVPVTQLDLL
SRYTAPGDEEKVKLAKLGGAEWQRTRAKVKKATEEMAQELIELYARRRQATGYAFPPDGD
WQRDFETRFDYDETDDQLNATAEIKQDMEKGWPMDRLLCGDVGVGKTEVALRAAFKCVMG
GKQCAILAPTTLLAWQHYNTILSRMEAFPVKVEMMSRFRTAKQQKETLRGLQSGSVDIVV
GTHRLLSKDVKFHDLGLVIIDEEQRFGVKHKEKLKENFIGVDMLTLSATPIPRTLNMAMS
GIRDLSTIEQPPIERQPVETFVLEYNDVILAEAMKKELARGGQVYYLHNRVDNIEACAAH
VSKLVPGARIGIAHGKMTEEELNPVWQHLLNGEIDILVCTTLIETGIDVRNCNTLIIEDA
DRMGLAQLYQIRGRVGRSGRKAYAYFTFRRDKTLTDIAQKRLSAIREFTAFGSGFRIAMR
DLQIRGAGSLLGHSQHGHMEAVGYDLYVKMLGQAIARAKGEPVRRDKSECLVDLRVDAFI
PEKYIADGPGRIEAYKRIAAIQTAEDAADVLDELIDRYGDPPPSVSDLVNVSLVRVQASA
VGVTEVTQKKDILTLQLESLDLPMIRGLLVAFNGRVTAGAGNRPYLSVTLQPDEKPLELL
QSILKAMAEILNGGEKAKDSK
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaagccttgctcaaggccacaccggaatatcagaagatcgccgccagctttgca
aagcctggccctgccgcgctgttcggtctgccgcccgcaggccgtgccctgctgtacgcc
gcgttgcaaaaagaccttggccgggtgctgtgcatcgtgacccccggcgaggccgaggcc
acccactttgcggacgatctcaaggcgttgggcctttctgccgccgtgttcccgccccgg
gacttcatgctgcgcccggtggagggcgcgggccgcgaatacgagtaccgccgcctttcg
gtgctgggctcccttgcaggcgggcggctgaacgcggtctgcgtacccgccgaagcgctg
ttgcagtacaccgtgccccgggatgaatttttaaagaacactcttaccctcaaacccggc
atggtgtacaaccgcgagggtcttgtggcccggctgttcgccgccgggtatgtgcggcgc
agtcaggtggacggcccgggacagttcagcgtgcgcggcgacatcgtggatatctatgcg
ccggatatgcgccagcccgcccgcgtggaatactgggacgatgagatcgattccatttcc
tcctttgacctgctcactcagcggcgggacagcgcactggataaaatttatctttcccct
gcccgcgaggtgctgttcggcgacacagctgagaccgccgaggccctgcgtgccgccatc
aagaaggcgcgcggccggcaccgcaccgcactggaaaaggccacggaagccgaccttgct
cagctggactccggcctgatgccggaagctatggataaatactacggcctgcgctatccg
gacccggccaccctgctggatcatctggacacgccgctgttcattctggacgaggtgggc
ggcatccgggacgcccagaaggccaccgagttccgccgcagcgaggagctgaccggcctg
ctggaggagggcgtgctctgccccgggctggatgtgctctaccagaccatggacgacctt
gccgcttccgcccagaagcagagcaccctgctgtgcgagaacttcctgcgcggcatgaac
gaattcaaactgaaagatctcatcaacgccgaagcctttgccgcccccaactggaacggc
gacctcgcttccctgcgggaggatctggaccccctcattgcgcagggctatgccgttacc
ctgttctccggcacccccaagggtgccgccgccctcacccgcgaccttgccgacaagggc
tactccgtgagcatgagccgggatgtgcggcccacaaaaggcatcgtgcaggtgctgccg
ggtcatctgaccgccgggtgcaccttcccgtttgcccatgcggcggtgctgtccagccgt
cggcacggtctggaggaagagaccgccgccgagaccaagaagcgcaaaaagaacaagaac
gccctttccagcctttcggacatcaagcctggggactatgtggtgcaccagagccacggc
atcggcatgtatgcgggcatccagcggctggaagtgcagggcgccacgaaagattacctc
aaggtacagtattccggctcggacgtgctgtacgtgccggtaacccagctggacctgctg
agccgctacaccgcccccggcgacgaggaaaaggtaaagctggcaaagctgggcggtgcc
gagtggcagcgcacccgcgccaaggtgaaaaaagccaccgaggaaatggcgcaggagctc
attgagctgtacgcccgccgccgtcaggccacgggctacgccttcccgccggacggcgac
tggcagcgggactttgagacccgctttgactacgacgagaccgacgaccagctgaacgcc
accgccgagatcaagcaggacatggaaaagggctggcccatggaccggctgctgtgtggc
gacgtaggcgtgggcaagaccgaagtggccctgcgcgccgccttcaagtgcgtgatgggc
ggcaagcagtgtgccatccttgcccccaccaccctgctggcatggcagcactacaacacc
atcctctcccgcatggaagccttcccggtgaaggtggagatgatgtcccgcttccgcacc
gcaaagcagcagaaggagaccctccggggcctgcagtcgggcagtgtggacatcgtggtg
ggcacccaccggctgctgtccaaggacgtgaagttccacgacctcggccttgtcatcatc
gatgaggagcagcgcttcggcgtcaagcacaaggaaaagctcaaggagaacttcatcggg
gtggacatgctcaccctgtcggccactcccatcccccgcaccctgaacatggccatgagc
ggcatccgggacctttccaccattgaacagccgcccatcgagcggcagcccgtggagacc
tttgtgctggaatacaacgacgtcatccttgccgaagccatgaagaaggagcttgcccgg
ggcgggcaggtgtactacctgcacaatcgggtggacaacatcgaagcctgcgccgcccat
gtgagcaagctggtgcccggcgcacgcatcggcattgcccacggtaagatgaccgaggaa
gagctgaaccccgtgtggcagcatctgctgaacggtgagatcgacattctggtgtgcacc
accctcattgagaccggcatcgacgtgcgcaactgcaacaccctcatcatcgaggacgcc
gaccgcatgggccttgcccagctgtaccagataagaggccgggtgggccgctccggccgc
aaagcctatgcctacttcaccttccggcgggacaagaccctgaccgacatcgcccagaag
cggctctccgctatccgggagttcacggccttcggctccggcttccgcatcgccatgcgg
gatctgcagatccggggtgcaggcagtcttctgggccacagccagcacggccacatggag
gccgtgggctacgacctctacgtgaagatgctggggcaggccatcgcccgggccaagggc
gaacctgtccggcgggacaagagcgaatgccttgtggacctgcgggtggatgccttcatc
ccggagaagtatatcgcagacggcccgggccgcattgaggcttataagcgcattgccgcc
atccagacggcagaggacgccgccgatgtgctggacgagctcatcgaccgctacggcgac
ccgccgccctcggtgagcgatctggtgaacgtgtcactggtgcgcgtgcaggccagcgct
gtgggcgtgaccgaagtgacccagaaaaaggacatcctcaccctgcagctggaaagtctg
gatctgcccatgatccggggcctgctggtagccttcaacggccgtgtcaccgccggtgca
ggcaatcggccctacctctcggtcacgcttcagcccgacgaaaagccgctggagctgctg
caaagcatcctcaaggcgatggcagagatcctgaatggcggagaaaaagcaaaagacagc
aaatga
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