Faecalibacterium wellingii: MTP37_12300
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Entry
MTP37_12300 CDS
T10369
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fah Faecalibacterium wellingii
Pathway
fah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTP37_12300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fah03019
]
MTP37_12300
03400 DNA repair and recombination proteins [BR:
fah03400
]
MTP37_12300
Enzymes [BR:
fah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MTP37_12300
Messenger RNA biogenesis [BR:
fah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MTP37_12300
DNA repair and recombination proteins [BR:
fah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MTP37_12300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
UQK56394
LinkDB
All DBs
Position
complement(2600044..2601621)
Genome browser
AA seq
525 aa
AA seq
DB search
MENPHSILKKVFGYDSFRPGQEEIVSRLLAGQDVLAVMPTGAGKSICYQVPALLLPGITI
VVSPLVSLMKDQVGALVQAGVAAAFLNNSLTDNQKALMLRRAREGWYKIIYVAPERLEMP
GFQRFAQERTISMVTVDEAHCISQWGQDFRPSYLRIKAFVDSLPSRPVVGAFTATATAHV
RDDIREQLALQKPYEVTTSFDRPNLYFETRRALPSQKPKELLDLVLKEGSNAGIVYCSTT
RQVDETARLLQSRGIRAAAYHAKLDADIRRKNQDDFLYDRVQVMVATNAFGMGIDKPNVR
FVIHYNMPKDLESYYQEAGRAGRDGQPARCTLLYSGTDVRTIRFFIEKEMEADNGLPADV
KAEAARKAEERLKYMTFYSTTQDCLRGFLLHYFGEAAPKKCGNCSCCLAAEQEAQLQVEY
SRRRAADNARRLSEKPRRARTTAGELSEFDQKLLNALYAQRKRLAGKQNIPAFMVFSDAT
LREMVEKKPRDMDELIRINGVGEHPAMMYGKDFLRVIIREVGSRE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacccgcacagcatcttgaaaaaagtttttggctacgacagcttccgccccggg
caggaggaaatcgtcagccgcctgcttgccgggcaggatgtactggcggtgatgcccacc
ggtgcgggcaaatccatctgctatcaggtgccggcgctgcttctgccgggaatcaccatc
gtggtgtcgccgctggtcagcctgatgaaggatcaggtgggggcgctggtgcaggccggt
gtggcggcggctttcctgaacaacagcctcaccgacaaccagaaggccctgatgctgcgc
cgcgcccgggagggctggtacaagatcatctatgtggcgccggagcggctggaaatgccg
ggcttccagcggtttgcgcaggaacggaccatcagtatggtgacggtggacgaggcccac
tgcatcagccagtggggacaggacttccgccccagctacctgcgcatcaaagcctttgtg
gacagcctgcccagccgtccggtggtgggtgcattcacggcaacggctaccgcccatgtg
cgggacgacatccgggaacagctggccttgcagaaaccctatgaggtgaccaccagcttt
gaccgtccgaacctctattttgagacccggcgggccctgcccagccagaagccgaaggag
ttgctggatcttgtgctgaaagagggcagcaacgcgggcatcgtctactgcagcaccacc
cggcaggtggatgagaccgcccgtcttctgcagagcaggggcatccgggctgcggcttac
cacgccaagctggacgcggatatccggcgaaagaatcaggacgatttcctctacgaccgg
gtgcaggtcatggtggccaccaatgccttcggcatgggcatcgacaagcccaacgtgcgg
ttcgtgatccactataatatgcccaaggatctggaaagctattatcaggaggccgggcgt
gcaggccgcgatggacagcccgcccggtgcacgctgctctattccggcaccgatgtgcgc
accatccggttcttcatcgagaaggaaatggaggcagacaacggcctgcccgccgatgta
aaggccgaagcggcccgcaaggcggaagagcggctcaagtatatgaccttctattccacc
acgcaggactgcctgcgtggctttctgctgcactatttcggcgaagcggcacccaaaaaa
tgcggcaactgctcctgctgtctggctgcagagcaggaagcccagctgcaggtggagtat
tcccgccgccgtgcggcagacaatgcaagacggctgagcgagaagccgcgtcgtgccaga
acgaccgctggagagctgagcgagttcgaccagaagctattgaacgcgctgtatgcccag
cgcaagcggctggccggaaagcagaatatcccggcctttatggtgttcagtgatgccacc
ctgcgggagatggtggagaaaaagccgcgtgatatggatgaattgatccgaatcaacggt
gttggtgagcacccggcgatgatgtacggcaaggactttctgcgggtgattatccgcgaa
gttggcagccgggaataa
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