Ferroplasma acidiphilum: FAD_0040
Help
Entry
FAD_0040 CDS
T04783
Name
(GenBank) exosome complex exonuclease Rrp41
KO
K11600
exosome complex component RRP41
Organism
fai
Ferroplasma acidiphilum
Pathway
fai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FAD_0040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fai03019
]
FAD_0040
Messenger RNA biogenesis [BR:
fai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
FAD_0040
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
FAD_0040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
ARD83975
UniProt:
A0A1V0N1K0
LinkDB
All DBs
Position
33797..34519
Genome browser
AA seq
240 aa
AA seq
DB search
MEGNIKLMREDGLRLDGRSLNEMRPIKIQTGVVDRADGSAFIEWGANKIIVAVYVREAYP
KHAQNIDRAIVKARYNMSGYSVEERKRPGPDRRTMEISKVVSEALSSAIVLEKLPRAEID
VFIQVLEADAGTRIASLTASSVAVADAGVPMRDLVVGCTAGKADGKIVLDLSKDEDNFGQ
ADIPMAILPRTGKVVLLQLDGDVTEEEFNEATSMMMDAMPRISELQRNALMSKYSIEDGE
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaaatataaaattgatgagagaagatgggctcaggcttgatgggagatcattg
aatgaaatgcgtcccataaagatccagacaggagttgtggaccgtgcagatggttcagcg
tttatagaatggggtgccaataaaatcattgttgccgtatatgtaagggaagcctatcca
aaacatgcccagaatattgacagggctatagtcaaggcaaggtataatatgtcaggatat
tccgtagaggaaagaaaacgccctggcccggacagaaggacaatggaaatatcaaaggtt
gtttcggaagcattatcttctgcaattgtccttgaaaaactcccaagggctgaaattgat
gtgtttatccaggttctggaagcggatgcaggcacaagaatagccagccttacagcttca
tcagtggctgttgcagatgccggggttcccatgagagacctcgttgtaggctgtacagca
ggaaaggcagatgggaagattgtacttgacctctcaaaggatgaggacaatttcggccag
gcagatataccgatggctattttgcccagaactggaaaagtagtattattacagcttgac
ggggatgttacagaggaagagtttaatgaagctacatcgatgatgatggatgcaatgcca
agaatttcggaattgcagagaaacgctttgatgagcaaatacagtatagaggatggtgaa
taa
DBGET
integrated database retrieval system
