Ferroplasma acidiphilum: FAD_0186
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Entry
FAD_0186 CDS
T04783
Symbol
cbf5
Name
(GenBank) H/ACA RNP pseudouridine synthase Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fai
Ferroplasma acidiphilum
Brite
KEGG Orthology (KO) [BR:
fai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fai03016
]
FAD_0186 (cbf5)
Enzymes [BR:
fai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FAD_0186 (cbf5)
Transfer RNA biogenesis [BR:
fai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FAD_0186 (cbf5)
Prokaryotic type
FAD_0186 (cbf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
Pus10_C
UPF0113
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ARD84116
UniProt:
A0A1V0N1Z9
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All DBs
Position
147055..148110
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AA seq
351 aa
AA seq
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MYASNSTPEEINGFIVIDKPKGPTSHQIDAWVREITGEKRVGHIGTLDPNVSGVLVMALG
KATKLIDIVHERPKEYISVMRLYSTADTDNIMKVFKEFTGKIYQLPPVRSAVSRQVRERT
IYNMDVLEIQEKLILFRVKCESGTYIRTLCTDMGYVIGTGAQMADLRRLSTGQFNESHIH
TLQELSDSVVLKKQGDTSLFDNMVIPMDFVFADSPKVVVKNTAIKNIMHGSDIYPSGIKA
LIGDIHKGSRVAIYSGDNELLAFGTMLVDSLNDLKAVDLDGILSDKYGENNVVRKNNRQK
NIPVQKPAKRLHEHIRKPEARDNPGNGRDMFRKNPGFKGNPSKIRKRKNKF
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcttcaaattcaaccccggaagaaataaacggttttatcgtgatagacaagccg
aagggcccgaccagccaccagatcgatgcatgggtcagggaaatcacaggtgaaaaaaga
gtgggccatataggtacactggacccgaatgtatccggtgtccttgtaatggcacttgga
aaggccacaaaactgatagatatagtacacgaaaggccaaaagaatatatatctgttatg
aggctttactccactgctgatacagataatataatgaaggtgtttaaagaattcaccggg
aagatttaccagttgccccctgtgaggtcagcagtttcaaggcaagtcagggaaaggaca
atatataatatggatgtactggaaattcaggaaaaattaatacttttcagggttaaatgt
gagtcaggtacatatatacggacattatgtacggatatgggctatgtaattggtacaggg
gcccagatggcagatttgagaaggctttcaacagggcagtttaatgaatcgcatatacac
accctgcaggaactcagcgattcagtagttttaaaaaaacagggagacacatcattgttt
gacaatatggtaatccctatggatttcgttttcgccgattctccaaaggttgtcgtgaaa
aatacggcaataaaaaatattatgcacggttcggatatatacccttccggaataaaagcc
ctgataggggatatacacaagggaagccgtgttgctatatactctggtgataatgagctg
cttgcctttggcacaatgctcgtggacagtttaaatgaccttaaggcagtggaccttgat
ggaatattgagtgataaatatggagaaaataatgtggtacggaaaaataatagacaaaaa
aatatacctgtacagaaacctgcaaaaagattacatgaacatattagaaagcctgaggca
agggataatcccggaaacggaagagacatgttcagaaaaaatcccggatttaagggaaat
ccttctaaaattcgaaaaagaaagaataaattctga
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