Ferroplasma acidiphilum: FAD_0420
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Entry
FAD_0420 CDS
T04783
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
fai
Ferroplasma acidiphilum
Pathway
fai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FAD_0420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fai03021
]
FAD_0420
Transcription machinery [BR:
fai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
FAD_0420
Prokaryotic type
Archaeal type
TFB
FAD_0420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Cyclin_C
Sigma70_r4
BRF2-like_C_cyclin_rpt
Lar_restr_allev
Zn_ribbon_IS1595
Zn_ribbon_3
Zn_ribbon_LysW
RB_B
DUF6398
Zn_ribbon_9
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ARD84338
UniProt:
A0A1V0N2I0
LinkDB
All DBs
Position
378758..379675
Genome browser
AA seq
305 aa
AA seq
DB search
MKTDEVKNCPECGSIHLVKDYDRGELTCYDCGIVIEDSLIDQGPEWRAFDSEQDGKRSRT
GSPMSFLSHDKGLATEISWSNKDYYGKRIPHKNRSQIYRVRKWHQRIRVSNAAERNLALA
LQVLNEDGAKLGIPKDIKESAALIYRKAVEKNLIRGRSIESIVCASIYASCRMINIPRTL
DEISKVSEVNKKKIGKAYRHLAKELALNLQPTTPYSYVSQFCNKLDLDKQVIMDSEHIIR
LAGESGLSTGKGPTGIAAAAIYIAAMKNGKQRTQKDVARVSGVTEVTIRNRYKEISKKLG
IDDVD
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagatgaagttaagaattgtcctgaatgcgggtcaattcatttggttaaggat
tatgacaggggtgaattgacatgctatgattgtgggattgttatagaagattccctgata
gatcaggggcctgaatggcgtgcatttgattctgaacaggatgggaagaggtcaagaacc
gggtcacctatgagttttttaagccacgacaaggggcttgctacagaaatatcatggtca
aataaggactattatggaaagcggattccgcataaaaacaggtcgcagatataccgtgta
aggaaatggcatcagaggataagggttagcaatgctgccgaaagaaacctggcactggcg
ctccaggttttaaatgaggacggggcaaaacttggaattccgaaagatatcaaagaaagt
gctgcactgatttatagaaaggctgttgaaaaaaaccttatcaggggaaggagcatagaa
agcattgtatgtgcttctatttacgcatcctgcaggatgatcaatatacccagaacactt
gatgaaatttcaaaggtttccgaggtcaataagaaaaaaattggaaaagcttaccgccat
cttgccaaggaactggcacttaatctacagccaacaactccatattcatatgtatcacag
ttttgcaataaactggacctggacaagcaggttataatggacagcgagcatataatcagg
cttgccggagaatcaggtctatctactggaaaggggccaactggcatagctgctgcagcc
atatacatcgcagccatgaaaaacggtaaacagcgtacgcagaaggatgttgcccgtgtg
tccggagttaccgaggtaaccatcagaaaccgttataaggaaattagcaaaaagctagga
atagatgatgtagattaa
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