KEGG   Ferroplasma acidiphilum: FAD_0654
Entry
FAD_0654          CDS       T04783                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
fai  Ferroplasma acidiphilum
Brite
KEGG Orthology (KO) [BR:fai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fai03400]
    FAD_0654
Enzymes [BR:fai01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FAD_0654
    5.6.2.6  RNA 3'-5' helicase
     FAD_0654
DNA repair and recombination proteins [BR:fai03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    FAD_0654
SSDB
Motif
Pfam: DEAD_assoc DEAD WHD_Lhr Helicase_C ResIII AAA_19 Cas3-like_C_2 TrmB TFIIE_alpha DUF5805 T2SSE
Other DBs
NCBI-ProteinID: ARD84564
UniProt: A0A1V0N381
LinkDB
Position
606712..611808
AA seq 1698 aa
MIYNNQFKVEETLPFLDDIVAQWFNTKYSELSEPQKKAIPLIHQKKNVLVSSPTGTGKTL
TGFLSIINELFKKARNNELEDKIYCVYISPLKALANDINKNLNEPLSEIYTLAREKGLDI
PEIKVAVRSGDTAQSDRNKMLRKPPHIIITTPESFSLAITATKFKEKFSSVEYVILDEIH
EVSSTKRGSLLSFNLERLENLSPGFVRIGLSATQAPLDLIGSYLCGYNGEHKRDFEIIEV
NTNKYLDLSIITPVKDLTMVSYEVANEKMYDILVDLVNSHKTTLIFTNTRSSTEHVAMRL
KARGIENIEAHHSSLGKQTRIEVENRLKNGELKCVITSTSLELGIDIGYIDMVIQIGSPK
SVSRALQRIGRSGHGVKDLSLGRFIVFDLDDLMECAVMTKAAYDHEIDKVTVPENPLDVL
SQGIISMSLEKNWDVDVAYNVIRNSFSFHTLEYGDYISTLQYLSGKIEGNTLFSKIWYDE
DEKVFGKKASTRMIYFMNVGTIPEEANYNVVNEKGRMIGQLSDKFVERLKNGDIFVLGAK
TYMFLKASKNNITVKVATGMKPTVPSWTGELLPRSYDLGILIGEFRKTLYERIKNGEETE
KWLMENYRVDSFGARSLISYVKTQGNFTIPTEDLLYIEGYIDNDLYSIIFHIPLGRRVND
ALSRAYGLAVSNKYGANTRISVNDNGFTLTLNRKVPIKDVVGLLTPSNFRDLVDRSIINT
ELFKQRFRYCATRSLMVLRKYKQTDISVARQQLRSDRLLRILESMDNFPVIKEAFNEVKY
DVMDVERAAWFVNDVISKKHYKIKDYSTETSPFSYNLILSGVSDIVLMEDRSKLLKELRS
KLLDKIYGTEGIEFLIKDSKLVENYFKNKLPAIQDIESYREFLEHFLYVDPFRKKFDSPL
EYATVDLDEMTEQLINSGELMYCFIRSDQWVSREYYPVVYHLFRREIELNSKDTEVYNHI
DNSSFNELKKTGMLEQDLKDSLIKLESGYRIRKIIKNGNQYYIRNQEMPEKPANAMKQAV
SLILSSYGPLSFDELLIRLPVDNGELETTLREMERSGSLIFDYITPIFMKQYMMKQDFDA
IVNSTSYDVSRKRISNFSTDVASIEDYFEKYGFAFDVYDIKVRTSHFRLELLEKAIKNGT
VFYTRAIKNKHVYIAKWLMDILYNLRAEKNGPEEAKILDYIEKGVDTEEKLSEITGFDIK
IVKAVIKNLQFKIQVVNGPGGDIQVYNPETGIDVNNIIEKFGPITARELARFFWINPGKI
DYSRFAPIYFRNEIYYGELPDAPENTSIIVRKNDPLSLYLGKYVRNDDYNARFIYHGSEE
TMFYMEEKEPGLWIENLDFESGKNTGFLETIQKAAERTGMDSIIIDSADQGLLDTASGYG
YRVSGNYIYKGDFEVINMDMEGLLSMAVNLYGSRKGTMNYNELTRIFFGFRTDMEAYYSG
IRNVELENYYSSMLIYTFDGPFNVQAYGTKNVIALYKAIRKRELTEEEETVYKYLISRNA
TENELVKSLKMNSFKVKETIKSLYSMNAIAKDKSKKYITINDEYTRIEAIEILLRELVKR
IGFFDIKIYRNMVGIYTDVEYKLVVSKLLHEHTIREVLVPGENRLIYIGIDLPGKAIKHK
ISRIIPPKDIIALIFPDFIKLKFHTVNSYLFFMEDSIKLSFSVKKSGRYLGIKNIVGDTS
YRDMARIEFNNTGYILSN
NT seq 5097 nt   +upstreamnt  +downstreamnt
atgatatacaataatcaatttaaggtagaagagacattgccttttctagatgacattgta
gcgcaatggtttaatacaaaatatagcgaattaagcgaaccgcagaaaaaggcaatacca
ttaatccaccagaaaaagaacgtactggtatcatcacccacgggaacaggcaaaacgctc
acaggcttcctttcaataataaatgaactttttaaaaaggcgagaaataacgaacttgaa
gataaaatatactgtgtttacatttcaccattaaaagcactggcaaatgatataaataaa
aatcttaatgagcccctttcagagatatataccctggccagggaaaaagggcttgatata
ccggaaatcaaggtggcagtgagatccggagataccgcacagagtgatagaaataaaatg
cttcggaaaccgccacacataataataacaactccagaatcattctcgcttgcaataacc
gcaacaaagttcaaggaaaaattttccagcgttgaatatgtaatactggatgagatacat
gaggtttcatcaacgaaaagagggtcattgctatcatttaaccttgaaaggcttgaaaat
ctctcgccgggatttgtacgcataggattatctgcaacacaggcgccattagacctcata
ggttcttatctttgtggctataatggtgaacacaaaagggattttgagataattgaggta
aatacaaataaatatcttgatctgagcataattaccccggttaaggatttaacaatggta
agctatgaggttgccaatgaaaaaatgtacgatatattagttgacctggttaacagccat
aaaacaacacttatatttacaaatacaaggagttccacagagcatgtggcgatgcgactc
aaagcccgtggaatagagaatatagaagcacatcattcttcactgggcaaacagaccagg
attgaggttgagaacaggttaaagaatggagaattgaaatgtgtcataacttcaacatca
cttgaactcggaatagatatcggatacatagatatggttatacagataggaagtcctaaa
tctgtatcaagggcattgcagcgtatcggcagatcaggccatggagtgaaagacctttca
ctggggcggtttatagtatttgacctggatgacctcatggaatgtgctgtgatgactaaa
gctgcatacgaccacgaaattgataaggttacggtaccggaaaatccccttgatgtgtta
tcacagggaataataagcatgtcactggaaaagaactgggacgttgatgtggcatataat
gttatccggaactcattttcatttcacacactggaatatggcgattatatatctaccctg
caatacctttccgggaaaatagaagggaatacattattttccaaaatctggtacgatgag
gatgaaaaggtattcggaaagaaggccagtaccaggatgatttacttcatgaacgttgga
actatacctgaagaagccaattacaacgttgttaatgaaaagggcaggatgatagggcaa
ttaagcgataaatttgttgaaaggctaaagaacggggatatctttgttttaggcgccaaa
acatacatgtttctgaaagcatcaaaaaataatataacggttaaagtggcaacaggaatg
aagcccactgtcccatcatggacaggcgaattgttgccaaggagctatgatcttggcata
ctgataggggaattcaggaaaaccctctatgaaagaataaagaacggcgaggagacagag
aagtggcttatggaaaattaccgtgttgattcattcggcgcccggagcctaatatcatat
gtaaaaacccaggggaatttcaccattcctactgaagatttgctctatattgaagggtat
atagataatgacctctatagcattatattccatataccacttggcaggagggtaaacgat
gcattatcaagggcttatggattggctgtttcaaataaatacggtgccaataccagaata
agtgttaatgacaatggatttacattaacacttaacagaaaagtccctataaaggacgtc
gtagggcttttaacaccatcaaacttccgggatcttgttgacaggtcaatcatcaatact
gaattattcaaacagcgtttcaggtactgcgccacaagatcattgatggttttaaggaag
tacaaacaaaccgatatatctgttgcaaggcagcaactgcgcagtgacagattactcaga
atactggagtccatggataattttccggtgataaaagaagcattcaacgaggtaaaatat
gatgtaatggatgttgagcgtgcagcatggtttgtgaacgatgtaatatcaaagaaacat
tacaaaataaaggattattctacagaaacaagcccattttcatacaaccttatactctca
ggggtttctgatatagtgctcatggaggacaggtcaaaactattaaaagaactcaggagc
aaacttctggataaaatatatggaacagagggcatagaatttcttataaaggactcaaag
ctggttgagaactacttcaaaaataagctcccggcaattcaggatattgagagttataga
gaatttctggagcatttcctttacgttgaccctttcaggaaaaaattcgactcaccgctg
gaatatgctacggttgatctggatgaaatgactgaacagcttataaattctggagaactt
atgtactgttttatacgatcggatcagtgggtatccagggaatattatccggtggtgtac
catctcttcagaagggaaattgaactgaatagcaaagatacagaagtttacaatcatata
gacaattcaagttttaacgaattgaaaaaaacaggaatgctggaacaggatctgaaggat
agcctgataaaacttgaatcgggctaccgtatcagaaaaattataaaaaacggaaaccag
tattacataaggaaccaggaaatgcctgaaaaaccggctaatgcaatgaaacaggcagta
tcgctcattctttcatcgtacgggccactttctttcgatgaattgttgatcaggctccct
gttgataatggagaactggaaacaacgctcagggaaatggagagaagtggatctttaatt
ttcgattacattaccccgattttcatgaaacagtatatgatgaagcaggatttcgatgcc
attgtcaacagtacatcatacgacgtgtcaagaaagaggatatcaaatttctccacagat
gttgccagcattgaggactattttgagaaatacggttttgccttcgatgtatatgatata
aaggtaaggacatcgcatttccgcctggaattgctggagaaagctataaagaatggaacg
gtattctataccagggctataaaaaataaacatgtttacattgctaaatggctcatggac
atcctctataacttaagggcagaaaagaatgggccggaagaggctaaaatacttgattat
attgaaaaaggcgtagatacagaagaaaaactttctgaaataacaggattcgatataaag
atagtaaaggcagtaattaagaatttgcagtttaaaatacaggtggtaaatgggcctggt
ggagacatccaggtttacaaccctgagacagggatagatgtaaataacataatcgaaaaa
ttcggccctattacagcaagggaacttgcaagatttttctggattaatcctggaaaaata
gattattccaggtttgctcccatttacttcagaaatgaaatttattacggggagcttcct
gacgcacctgaaaatacatctataattgtaagaaaaaatgacccactcagcctgtatctc
gggaaatatgtaaggaatgacgattataacgcacggtttatttaccatggttctgaagaa
acaatgttttacatggaagagaaagaacccgggttatggattgagaaccttgatttcgaa
agcggaaaaaacaccggatttcttgagactattcaaaaagccgcagaacgtacaggaatg
gattctataataattgacagtgcagatcagggccttctggatactgcaagtggctatggt
tacagggtttcaggcaattatatctataaaggggatttcgaagttataaatatggacatg
gaggggctattatctatggccgtaaatctttatggatcaagaaaaggaacaatgaattat
aacgaactcacccgaatattctttggattcaggacagatatggaagcatattattccggc
atcaggaatgtggaactggaaaattactatagttccatgcttatatatacatttgacggg
ccattcaacgtgcaggcatatggcacaaaaaatgtcatagccctttataaagctatcagg
aaacgtgaacttacagaggaagaagagactgtgtataaatacctgatatcaaggaatgcc
acggaaaacgaattggttaaatcactaaaaatgaactcttttaaggttaaagaaactata
aaatcactgtatagcatgaatgctattgcaaaggacaagtcaaagaaatatataacaata
aatgatgaatacacaaggatagaagcaatagaaatcctgttaagggaactggtaaagaga
attgggttctttgatataaaaatatacaggaacatggtaggaatttacactgatgtagaa
tataagctggttgtttcgaaacttctgcatgaacatacaataagggaagtactggtaccg
ggagaaaaccggcttatctacataggcatagatttgccaggaaaggccattaagcataaa
atctcaaggataatccctccgaaggacattatagctttaatattcccggatttcatcaag
ctaaagttccatacggtgaatagctacctgttctttatggaggattcaattaaactttct
ttctctgttaaaaaaagtggcaggtaccttggcattaagaatattgtaggggataccagc
tatagggatatggcgagaatcgaatttaacaatactggatatatactgtcaaattaa

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