Ferroplasma acidiphilum: FAD_0705
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Entry
FAD_0705 CDS
T04783
Name
(GenBank) DEAD box protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fai
Ferroplasma acidiphilum
Pathway
fai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FAD_0705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fai03019
]
FAD_0705
03009 Ribosome biogenesis [BR:
fai03009
]
FAD_0705
Enzymes [BR:
fai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FAD_0705
Messenger RNA biogenesis [BR:
fai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FAD_0705
Ribosome biogenesis [BR:
fai03009
]
Prokaryotic type
rRNA helicases
FAD_0705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ARD84611
UniProt:
A0A1V0N3D7
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All DBs
Position
668278..669570
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AA seq
430 aa
AA seq
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MDISENLRKSLGLMKFTEPTEIQEKAIPVVLTGKDVIIRSKTGSGKTAAYLLPVLNSVEK
LKGKGVKAIIILPTRELALQTHRVASRLGKISGIKSTIVYGGASIIRQVEELPGSDIVIG
TPGRILDLYNQKYLKLDHVKYLVLDEADLMLDMGFIDDIKKIISFTPEGRQTILLSATLP
AEVKTIANHFMNNPEFVDAGGDEAIPSSIKHLYTVSEKFDKFSTLMSYIHSYNSRKAIVF
VKTQRSGDLLNLILSRSGFNNVLIHGGMKQHARERSIADFRHIDSGILVATNVAARGLDI
PNITDIINFDAPESTETYAHRVGRSGRMGKDGRAMTIFDPSQKSLIQSIQRRNRIKMEKI
NIDLETEYTDINYGKLIAQFRDNEENAPEPDYHSRGRRPSGGRDRRPSSRRETGSRPGRS
SGNYRRREHQ
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggatatatcagaaaatttaaggaaatcattaggcttaatgaagtttacggaaccaaca
gaaatccaggaaaaagcaattcctgtagtattgacgggaaaggatgttattatacgttct
aaaacaggttcaggtaaaacagcggcatatctactgcctgtgttgaactcggtagaaaag
ttaaagggtaaaggtgtaaaagcaataattatattgccaacaagggaactggcgcttcag
acccacagggttgcctcaaggctcggaaaaatttcaggaataaaatcaacaattgtatat
ggtggagcatccataataaggcaggttgaggaacttcctggttcagatatcgtgatcggg
acacccggaagaatactggatttatacaaccagaaataccttaaacttgaccatgtcaag
tatctggtacttgatgaagcggaccttatgcttgatatgggattcatagatgacataaag
aaaattatctcatttaccccggaaggcaggcaaactatattgctatctgcaacattgcct
gcagaggttaaaacaatagcaaaccatttcatgaataaccctgagtttgtagatgcaggt
ggggatgaagctataccatcatcaataaaacacctttacactgtatctgagaagtttgac
aaattctcaactcttatgtcctacatacacagttataattccagaaaagctatagtattt
gtgaagacacagagatccggtgaccttttaaatctaatactctcaagatcaggattcaat
aatgtgctgatccatggtggaatgaagcagcatgcccgtgagaggtctatagcggatttc
aggcacatagattcagggatacttgttgcaacaaacgtggctgcaagggggcttgacatt
ccaaatattacagatataatcaactttgatgcgccggagagtactgaaacatacgcacac
cgtgttggcaggtcaggaagaatgggcaaggatggaagggcaatgacaatattcgatccc
agccagaaaagccttatccagagcatacagagaagaaacaggataaaaatggagaaaata
aacatagaccttgaaacagagtacaccgatatcaattacggcaaattaatcgcacagttc
cgtgataatgaagaaaacgcccctgaaccggattaccatagccgtggcagaaggccatca
ggcggcagggataggaggccatcttcccgcagggaaacaggaagcaggccaggaagaagc
agtggaaactaccgcagaagagaacatcaataa
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