Ferroplasma acidiphilum: FAD_1323
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Entry
FAD_1323 CDS
T04783
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fai
Ferroplasma acidiphilum
Pathway
fai03420
Nucleotide excision repair
fai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FAD_1323
03430 Mismatch repair
FAD_1323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fai03400
]
FAD_1323
Enzymes [BR:
fai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FAD_1323
DNA repair and recombination proteins [BR:
fai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FAD_1323
MMR (mismatch excision repair)
Other MMR factors
FAD_1323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_11
UvrD_C_2
AAA
AAA_30
DEAD
AAA_7
ResIII
Motif
Other DBs
NCBI-ProteinID:
ARD85187
UniProt:
A0A1V0N502
LinkDB
All DBs
Position
1314195..1316867
Genome browser
AA seq
890 aa
AA seq
DB search
MINRDTLVISNPGTGKTTMISNEVINLIKEGVKPEKILCITFTNNAVSELQKNIDKLLIA
NKIKNVTAYDVNIYTFHALAFQELFQSKAEKNIVSYNIARYLIYKKLRDLEAFNYGRDYV
IEDIVPKLENAIRYIKSFGIMPVDIAKNRDMIMESLRRKYNSGIVRNIGLEEEEYLFDYF
YQAFNYYEENKENPDFNDLLFQFQKLEDKKTYEYVFVDELQDVNDIESRIAMSTGNVKFL
VGDRKQSIFGFQGGALSVFNSLIGNSGIEKKDLKINYRSTETILAYSKQYYLKFENDVPE
LENFRGTKEKGNKVKIVEVDSPEDSTLEIINSIPESSGNIGIIARTNSQIDTISSLLDRY
NIDYSSDSNVHTINQAKKDITAFLKGILYDRPDDIINAMVTPFSGISLKEAFKIAESLRS
EENTIDLFDSSNPFFSLRNKELSRENIMDLFESRIFPIASSISREYFLTAATVKSSIGEF
FDAERDYTRKNFFDFLDLSYSENSSKSGNSRIILTTVHKAKGREFDNVIYLPKKPRKSDT
YIDIIVSSIIEEIKQINVDDELKNESVRIDFVAFTRAKEELWVCTNRREAPNYLIPEYSE
MVAYENIPEKQEITVPGKYNEAYLQFVSGDYNGAKETLSSKENWLKNIIYEFFQNKNVLS
FSLISIDNPFFMLKNNILKLNEKTDALYYGLNAHEMAESLYKNEIKNELLGSGDKQILSN
IESVVNQIKSGFNMEQIEAEVSAIARINQMFEEFSGEPDKIMFFGKIDAVFSDGKKYVIL
DYKTDKTTDRASHHRVQLLAYKILYSIKNNISPENIDTAIGYISMRGKINTHENTSGLIY
KQPDKYSETSLKKYISRFLEYKSNPDKFIEDYLKQPSEDTLYERLAELLK
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatagagatactttagtaatatctaatccaggaacggggaaaacaaccatgatt
tccaatgaagttattaatctgattaaagaaggggtaaaaccggaaaaaatactctgcatc
acatttacaaacaacgcagtaagtgaactccagaaaaatattgacaaattgctgattgcc
aataaaattaagaatgtaactgcatatgatgttaacatttacacattccatgcactggca
ttccaggaacttttccaatcaaaggcggagaaaaatatagtatcatataatattgcaagg
taccttatatataagaagctcagagaccttgaggcgttcaattatggcagggactatgtt
attgaagatattgtccctaaactggaaaatgcaatcagatacataaaaagcttcggaatc
atgccggtagacatagcaaaaaacagagacatgataatggaatcactgagaagaaagtat
aactccggaattgtgagaaatattggccttgaagaggaagagtacctgtttgattatttt
taccaggcatttaattattatgaggaaaataaagaaaacccggatttcaacgatttattg
tttcaattccagaaactggaagataagaaaacatatgaatatgtttttgtagatgaattg
caggatgttaacgatatagaatccagaattgcaatgtctacaggaaatgtgaaatttctg
gtgggcgataggaaacagtccatatttggatttcaggggggcgcattatcagtatttaac
tcattgattggaaacagcgggatagagaagaaagacctgaagattaactacagaagcact
gaaaccatactggcttactcgaaacaatactatttaaaattcgaaaatgatgtgccggaa
cttgaaaatttcagaggcacaaaagaaaaagggaataaggtaaaaattgttgaagtagat
tctccagaagactccaccctggaaattataaatagcattccagagtccagtggcaatata
ggaatcatagcaaggacaaattcacagatagataccatatcttcacttcttgataggtat
aatattgattattcaagcgattcaaatgtacacacaataaatcaggcaaaaaaagatata
accgcatttttaaaaggcattctgtatgatcgcccggatgatataattaatgccatggta
acaccattttctggcatatcgctgaaggaggctttcaaaattgctgaatcactcagaagt
gaagaaaatacaattgatttatttgacagttcaaacccatttttctcattgaggaataaa
gaactgtccagggaaaatataatggacctcttcgaaagcagaatatttcctattgcatcg
tccataagcagggagtatttccttacggctgctacagtaaaatcttccatcggtgaattt
tttgatgcggaacgtgattatacacggaaaaatttcttcgatttcctggatttatcgtat
tctgaaaattccagcaaatctggcaattcacgtataattcttaccacagtgcacaaggct
aaagggcgagaatttgacaatgtaatatatctgccaaaaaagccgagaaaatcagataca
tatatagatattattgtatcttccataattgaggaaataaaacagatcaacgttgatgac
gaacttaaaaatgagagcgtcagaatagactttgtggcttttacaagggcaaaagaggag
ctctgggtgtgtacaaatcgcagggaagcgccgaattaccttataccagaatattctgaa
atggttgcctatgagaatattcctgagaaacaggagattactgtacctggaaaatacaat
gaagcatatttgcagttcgtatcaggtgattataatggcgctaaggagaccctttccagc
aaggaaaactggttaaagaatataatctacgaatttttccagaataagaatgtcctttca
ttttcgcttataagcattgacaacccgtttttcatgctaaagaacaatatattgaagctc
aatgaaaaaacagatgcattgtattacggattaaatgcccatgaaatggcggaatcgctt
tataaaaatgaaataaaaaatgaacttcttggcagtggggataaacagatactctcaaat
atagaatctgttgtaaaccagataaaatcaggttttaatatggaacagattgaggcagaa
gtttcggcaatagccaggataaaccagatgtttgaggagttttctggtgaaccggataaa
attatgtttttcggcaaaattgatgctgttttcagtgacgggaaaaaatatgttatcctg
gattacaaaacggataaaaccacggacagggcttcacaccacagggtacagttgttagcg
tataaaatcctctattctataaaaaataatatcagccctgaaaatatagatactgccata
gggtatattagcatgagaggaaaaataaacacacatgaaaatacatcaggcctaatttat
aaacaaccggacaagtattctgaaacttcactgaaaaaatatatatcaagattccttgag
tataaaagcaatccagataaatttattgaggactatcttaagcagcccagtgaagataca
ttatatgaaaggttagcagaacttctaaaataa
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