Ferroplasma acidiphilum: FAD_1775
Help
Entry
FAD_1775 CDS
T04783
Name
(GenBank) tRNA splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
fai
Ferroplasma acidiphilum
Brite
KEGG Orthology (KO) [BR:
fai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fai03016
]
FAD_1775
Enzymes [BR:
fai01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
FAD_1775
Transfer RNA biogenesis [BR:
fai03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
FAD_1775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
ATG8
Motif
Other DBs
NCBI-ProteinID:
ARD85614
UniProt:
A0A1V0N684
LinkDB
All DBs
Position
complement(1742291..1743157)
Genome browser
AA seq
288 aa
AA seq
DB search
MEIVCRNTHFVLSGMDISQIINKYHVGKMRDNVLELNPCECIYLYMKGKIMPEPEMGLPQ
VISSVFTEDLYIYYVYSILKEKGLIVKRDGNKFFYKKTGGEYGIPVILIKEGDLIDFSSL
YVDLPAIFITVDEEKSITYFRADFIDPEGNADSDISIGNPEKLNNIYYTTNSHPEWFGQE
FMGVKILNQFEANYISGELKTDEDKLYRDLIKRHFIVKSGFKYGQNFRIYSDSMENHAEF
LVSLMTSEKWYKISRAIRLSTSVRKKTLIAGFIGNDLKYIYIERLRDI
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgtatgcagaaacacacattttgttttgtctggcatggatatttcacagata
atcaataaataccatgttggaaagatgagggataatgtgctggaactgaacccctgtgaa
tgcatatacctgtatatgaaaggaaaaataatgccggaaccggaaatgggattgccgcag
gttataagcagtgtgttcaccgaagatctttacatctattacgtatattctattttaaaa
gaaaaagggctaattgtaaaaagggatggaaataagtttttctacaaaaaaaccggcgga
gaatacggcatacctgttatacttatcaaggaaggcgatttaatagatttctcaagcctc
tatgtggacctgcctgccatattcataactgttgatgaggaaaaaagcataacatacttc
agggcggattttatagatccggagggtaacgcagattcagatatttccataggaaatcct
gaaaaattgaataacatatattacacaacaaacagccatcccgaatggttcgggcaggaa
ttcatgggtgtcaaaatactcaatcagtttgaagcaaattatatttctggagaattaaaa
acagatgaggataagctttacagggatcttataaaaaggcattttattgtcaaaagtgga
tttaaatacgggcagaatttcaggatttattcagattctatggaaaaccatgcggaattt
cttgttagccttatgacttctgagaaatggtataaaataagcagggcaataagattatcc
accagtgtcaggaaaaagactctgattgccggctttataggcaatgatttaaaatatatt
tatatagaaagattaagggatatttag
DBGET
integrated database retrieval system
