Ferroplasma acidiphilum: FAD_1782
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Entry
FAD_1782 CDS
T04783
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
fai
Ferroplasma acidiphilum
Brite
KEGG Orthology (KO) [BR:
fai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fai03016
]
FAD_1782
Enzymes [BR:
fai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
FAD_1782
Transfer RNA biogenesis [BR:
fai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FAD_1782
Prokaryotic type
FAD_1782
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ARD85621
UniProt:
A0A1V0N682
LinkDB
All DBs
Position
complement(1747931..1749175)
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AA seq
414 aa
AA seq
DB search
MEDSIIGINGYSTDTPGIDGNIKYDPESFIVNEIPVTIPENNNGKYTILKVRLRNWDTNK
FLMYLADQLHISNKRITYAGTKDKIGITTQYFCINMPENQQINNISIKDAEIISSFRTDK
LVKLGDLLGNEFIISIQSTDDNTQKIGETVESIVKNGGFPNFYGYQRFGSIRANTHKIGK
LLVQNKYEDAVKTYIYDPEFDREDYRRTFGETGDAKRAIKEFPEYLTFERSLLGYIIREN
TYKNAFSVFPRNLSMLFIHAYQSYLFNRILSDRMKYAGSMHKVLEGDLLYPVDRYFNPDR
SQLIRASSYNIEKLNNLSRENRIRTVIPLIGYSTELSSGIEGEIESRIMAEEGIEKKDFN
LSSDRRLGSSGDYRIMSVLPVDFKIIEKNRINFSLGKGIYATSLLRELIKGDLN
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggaagatagcatcataggcattaatggatattctactgatactcctggcattgatggt
aatattaaatatgatccggaaagttttattgtaaatgagatacctgtaacaattcctgaa
aacaataatggcaagtataccatattaaaggtgcgcctgcggaactgggataccaataaa
tttttgatgtacctggcagatcagttgcatataagcaataaaaggataacatatgcaggg
accaaggataaaataggcataacaacacagtacttctgcatcaatatgccggaaaatcag
caaatcaataatatatctataaaggatgccgagattatttcatccttccgtacagataaa
ctggttaaactgggcgatttactggggaatgaattcataataagcatacaatctactgat
gataatacacagaaaataggggagaccgtggagagcatagttaaaaatggaggattccca
aatttttatgggtaccagagatttggcagcataagggcaaatacccataaaattggtaaa
ctgctggtacagaataaatatgaagatgctgttaaaacatatatttatgatcccgaattt
gaccgggaggattacagaagaacattcggagagaccggggatgcgaaaagggcaataaaa
gagtttcctgaatacctgacatttgaacgctcattgctgggttatattataagggaaaat
acatataaaaacgcattcagcgtatttcccagaaacctatctatgttattcatacatgct
taccagtcatatctttttaacagaatactctctgacaggatgaaatatgccggaagcatg
cataaagtcctggaaggggatttgctttatcccgttgacaggtattttaacccggatcgc
agccagttaatacgtgcatcttcatataatatcgaaaaactcaacaatctttccagggaa
aacaggatccggacagttatacccttaattggctattcaacggaactatcttcaggcatt
gaaggggaaatagaaagcagaataatggcggaggaaggaatagagaaaaaggatttcaat
ttgagttctgataggaggctgggttcatccggcgattatagaataatgtctgtgcttcca
gtagatttcaaaataatagaaaaaaatagaataaatttttccctgggaaagggcatttat
gcaacttccctgttaagagaacttattaaaggcgatttaaattaa
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