Flagellimonas alginilytica: ABTP35_00650
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Entry
ABTP35_00650 CDS
T11189
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
faj Flagellimonas alginilytica
Brite
KEGG Orthology (KO) [BR:
faj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
faj03009
]
ABTP35_00650 (rimK)
Ribosome biogenesis [BR:
faj03009
]
Prokaryotic type
ribosomal protein modification factors
ABTP35_00650 (rimK)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RimK
RimB-like
Rimk_N
GSH-S_ATP
ATPgrasp_ST
ATP-grasp_3
Dala_Dala_lig_C
GARS_A
ATP-grasp
TTL
D123
R2K_3
Motif
Other DBs
NCBI-ProteinID:
XHB41772
LinkDB
All DBs
Position
complement(145624..146994)
Genome browser
AA seq
456 aa
AA seq
DB search
MSDFKILGTEEWCQFDDLRIPAVKARVDSGAKTSSIQASKIKIFNKGFEEWVRFEVNPVQ
DNRSIAILCQAKLVDVRTVKSSQGIAEERPVIKTVVNIAGNVFDIELTLANRDTMEYRML
LGREAINERYLVDPSKSFIQGDYTDEEIEKKYQPFITEKKGLRLGLLASNPNLYSNKRII
EAGEMRGHKVVFLNVEHVYMKLDAATPEIRYRGGNILDKFDAVIPRIKPAVTFYGCALLR
QFDTLGVYCLNSADSIGRSRDKLFASQLFSKNDIHIPTTGFAKSPMDTKDLIRMVNGAPL
IIKLLESTQGKGVVLAETNKAAESVINAFKSVQTNILVQEFIKEANGHDIRCFVVNGKVV
ASMQRTAQKGEFRANIHQGGAAAKVKITPEERKLAIKSAKVFNLDVAGVDLIRSNKGPLL
LEVNSSPGLQGIENTTGKDIANVMIETIEKKLKYNG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgattttaaaatattgggaaccgaggaatggtgccagtttgacgatttaagaatt
ccggccgtaaaagccagagtagattccggagcaaagacatcatccattcaggccagtaaa
attaaaatattcaacaaaggatttgaggaatgggttcgctttgaggtgaaccccgttcag
gataataggagcatagccatcttgtgtcaggccaaattggtcgatgtgcgcacggtaaag
agttcacagggaattgcagaggaaaggccggtaattaaaacagtagtgaacattgccggc
aatgtattcgatatagaacttaccttggccaatcgggatacaatggagtaccgcatgctc
cttggcagggaagctatcaacgagagatacctggtagatccgtccaaaagttttatccag
ggcgattatacagatgaagaaatcgaaaaaaaatatcaaccctttattacggagaaaaag
ggactgcgtttaggccttttggccagtaatccgaacctgtacagtaataaaagaattatt
gaggcaggagaaatgcgaggccacaaagtggtttttctgaatgtggagcacgtttatatg
aaattggatgcggcaacgccggaaattcgatatcggggcgggaacatattggataagttc
gatgccgtgattcccagaataaaacccgcagtaaccttttatggttgtgcgctgttaagg
cagttcgataccttgggagtttattgcttaaattccgctgattccattggacggtcccgg
gacaagcttttcgcctcacaattgttttcgaaaaacgacatccatattcctacaacaggc
tttgccaaatccccgatggataccaaagatttgatccgaatggtaaacggagcccctttg
atcattaagcttttggaaagtacccaaggaaaaggcgtagtactggccgagaccaacaaa
gcggcagaaagtgtgatcaatgcctttaaaagcgttcagaccaatattttggtccaggaa
tttataaaggaagcgaacggccacgacattcgttgctttgtagtcaatggcaaagtagtg
gcatccatgcagagaacagctcaaaaaggggagtttagggccaatattcaccaaggaggc
gccgccgcaaaagtgaagatcacaccagaagaaagaaagttggccataaaatctgccaaa
gtatttaatttggatgtggcaggggtagatctaatccgatcaaataaaggtcctttgctt
ttagaagtgaactcatcaccgggacttcagggaatagagaatacaaccggcaaggacata
gccaatgtaatgatcgaaaccatagagaaaaagttgaaatacaacggttga
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