Flagellimonas alginolytica: ABTP35_01665
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Entry
ABTP35_01665 CDS
T11189
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
faj Flagellimonas alginolytica
Pathway
faj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
faj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABTP35_01665 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
faj03019
]
ABTP35_01665 (recQ)
03400 DNA repair and recombination proteins [BR:
faj03400
]
ABTP35_01665 (recQ)
Enzymes [BR:
faj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABTP35_01665 (recQ)
Messenger RNA biogenesis [BR:
faj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABTP35_01665 (recQ)
DNA repair and recombination proteins [BR:
faj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABTP35_01665 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
ArnR1-like_WHD
Motif
Other DBs
NCBI-ProteinID:
XHB41969
LinkDB
All DBs
Position
complement(395407..397608)
Genome browser
AA seq
733 aa
AA seq
DB search
MSLTNTDLHSSLKKYFGFSKFKGLQEGVIQNILSDNDTFVIMPTGGGKSLCYQLPALMKE
GTAIVVSPLIALMKNQVDAIRGISEQHGIAHVLNSSLTKTEVKQVKEDIVNGVTKLLYVA
PESLTKEENVEFLRKVKLSFVAVDEAHCISEWGHDFRPEYRNLRGIINRLGDNIPIIGLT
ATATPKVQEDIIKNLGMTDAKVFKASFNRPNLFYEVRPKTKNVDADIIRFVKQNQGKSGI
IYCLSRKRVEELAQVLQVNGISAVPYHAGFDAKTRSKYQDMFLMEEVDVVVATIAFGMGI
DKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAYYAYKDVEKLEKFMSGKPVAEQ
EIGNALLQEIVAYAETSMSRRKFILHYFGEEFDEVNGEGADMDDNSRNPKPKEEAKEEVT
KLLHVVKETKEKFKTKEIVRILVGKTNAMISSHKTDEKEFFGIGKEQDKTFWMALTRQVL
VAGLLKKEIEQYGILHLTENGKKFLDNPESFMMTKDHVYSKDDTGNIVVPEKSNGAVADE
NLLKLLKDLRKREAQKREVPPFVVFQDPSLEDMSLKYPVTMQEIINIQGVGEGKAKKYGK
PFVDLISKYVDENEITRPDDLVVKSTGANSGLKLYVIQSVDRKLPLDDIASAKGLELPEL
IKEMEQIVFSGTKLNIGYWIDEILDEDQQEEIHDYFLDADTDSISAAVDEFDGDYEDEEL
RLYRLKFISEVAN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgagcctaacgaacactgatttgcattcctcgctcaaaaaatattttggtttctcaaag
tttaaaggattacaagaaggtgtgatccaaaacattctaagtgacaacgatacttttgtg
attatgcccacgggaggaggcaaatccctctgttaccaattgcctgcattaatgaaagag
gggaccgccattgtggtttccccattgatcgcccttatgaaaaaccaggtcgatgccatt
cgcggaatatccgaacagcatggaatagcccatgtgttaaattcttccctgaccaagacc
gaggtaaaacaagtaaaggaggacatagtaaatggggttaccaaattgctctatgttgct
ccggaatcactgaccaaggaagaaaatgtggagtttttaagaaaggtcaaactttctttt
gtggcggtggatgaggctcattgtatatccgagtggggccacgactttaggcccgaatac
cgaaatttaagaggaattataaatcgattgggagataatattcccataatcggcctaacc
gctacggcaacaccaaaggtacaagaggatattattaaaaatttgggcatgacggacgcc
aaggtattcaaggcatcgttcaataggcccaatctattttacgaagtacgtcccaaaacc
aagaatgtggatgccgatattatccgttttgttaaacaaaatcaaggtaaatctggtata
atttattgtttgagcagaaaacgtgtagaagaattggcacaagtgcttcaggtaaacggg
ataagtgccgtgccctaccatgcaggctttgatgccaagacacgttccaagtatcaagat
atgttcttaatggaggaagtggatgtggttgttgctacgattgcttttggaatgggaatc
gacaagccagatgtccgatttgtgatccatcacgatattccaaaaagtatagaaagttat
tatcaggaaactggtcgcgcaggtagggatgggggcgaagggcactgtttggcctattac
gcctataaagatgtggaaaaactggaaaaatttatgtccggtaaacctgtggcggaacaa
gagatcggtaatgccctgcttcaagaaattgtggcttatgccgaaacctccatgtcccgt
agaaaatttatactacactatttcggtgaggaatttgacgaagtgaacggtgaaggcgcc
gacatggacgataactcccgaaacccaaaacctaaagaagaggccaaagaggaagtaacc
aaattgttgcacgtggtaaaggaaaccaaggagaaattcaagaccaaagaaattgtccgt
atcctggtgggcaaaaccaatgcgatgatctcctcccataaaaccgatgagaaagaattt
tttggaataggaaaagaacaggacaaaacattttggatggctttaacgcgccaagtgtta
gtggcaggtctcttaaaaaaggaaatcgagcaatacggtatcctgcatttaacagaaaat
ggcaaaaagtttttggacaatccagaatcttttatgatgacaaaggatcatgtgtattcc
aaggatgatacaggaaatatagtcgttcctgaaaaatccaatggagccgttgcagatgaa
aacttgttgaaattgctcaaagatctaaggaaaagggaagctcaaaaaagagaagttcct
ccatttgtggtctttcaagacccctcactggaagatatgtcccttaagtacccagtgacc
atgcaggaaataataaatattcagggtgttggcgagggcaaggcaaaaaaatatggtaaa
ccgttcgtagaccttatttccaaatatgtggatgagaacgaaattaccaggccggacgat
cttgtagtgaaaagtacgggggccaattcgggtttaaaactgtatgtaattcagagtgtg
gatagaaaattgcccttggatgatattgcatcggcaaaagggctggagcttcccgaactt
atcaaagaaatggagcagatcgtgttcagtggtaccaagttgaacattggttactggata
gatgaaattctggatgaagaccaacaagaagaaatccatgattactttcttgatgcggat
accgattccatttcggctgccgtagatgagtttgatggtgattacgaggacgaggagctg
cgtttgtaccgtctaaaatttataagtgaagtggcgaattaa
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