Flagellimonas alginolytica: ABTP35_02830
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Entry
ABTP35_02830 CDS
T11189
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
faj Flagellimonas alginolytica
Pathway
faj02024
Quorum sensing
faj03060
Protein export
faj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
faj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ABTP35_02830 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ABTP35_02830 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABTP35_02830 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
faj02044
]
ABTP35_02830 (secDF)
Secretion system [BR:
faj02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ABTP35_02830 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
ACR_tran
PAP2_3
Lsm_C
DUF6673
Motif
Other DBs
NCBI-ProteinID:
XHB42195
LinkDB
All DBs
Position
complement(635966..638935)
Genome browser
AA seq
989 aa
AA seq
DB search
MQNKGLIRLFAILFGLVSIYQLSYTFITNKLEKDAEAYAIGQISEAEEDYVAKREALEAS
YLDSISDNTVLGYTSYADAKTKELNKGLDLKGGINVTLQISVKDILKGLANNTKNPVFNK
ALADADEASKNSDNTYLELFFEAFDNIKGDTKLASPDIFANKGLSDDINFQMSDDEVKPI
IRRKIDESIVSAFEVLRERIDGFGVTQPNIQREGNSGRILVELPGAKDIARAQELLSSTA
QLEFWETYPQSNQSIATFLVNANERLKEILEPKTSTEDEISKPESEIDSLLSDVAQDSLD
MSQDANPILGKLIPADPGSHAIARALVADTAEIGGYLRMPAIKRLLPNDVQFTKFLWERP
SQDAEIVDLYALKSNREGTPRISGDVVSDAQDTFDQFNKPAVSMTMNTRGAKEWEELTGD
AYNNQTGIAIVLDNKVYTAPGVSSGPISGGRSEITGTFTVNETKDIANVLRAGKLPASAD
IIQSEVVGPSLGQEAIDSGFMSFMIAMAFVLLWMIFYYGRAGVFADIALVFNILLIFGVL
TSLGAVLTLPGIAGIVLTIGMSVDANVLIFERVKEELARGKGKAQAIADGFGNALSSILD
ANITTGLTAIILFVFGSGPIKGFATTLMIGIVTSLFTAIFVTRLMIEAYTSKKGRRLDFS
TGITKNLFTNLDINFLSKRKIAYVVSAILVAVSVFSLFTNGLNQGVDFIGGRSYQIRFEK
AVNPSEIASELNTVFGSGTNVKTFGDANQIKVTTPYKVDQEGVEIDTEIQDKLYTSLQKY
LPDGTSFEDFTVGASEKSIGILQSVKVGPTIADDIKKNAFLAIIGSLAVVFLYILFRFRK
WQFSLGAVVAVFHDVMIVLGIFSLTGSIMPFNMEIDQAFIAAILTVIGYSLNDTVVVFDR
IREVTGLKGWKGGEHINLALNSTLSRTLNTSLTTLIVLLAIFIFGGESLRGFMFAMIIGV
IVGTYSSVFIATPVMFDSLKNKVAEATES
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgcagaataaaggacttataaggcttttcgcgatcctttttggcttggtgagcatctat
cagttatcttatactttcatcactaataagttggagaaagatgctgaggcttacgcaatt
ggccaaatttcggaggctgaggaagattatgttgcaaagcgcgaagctttagaggcatcg
tacttggattccatcagtgataatactgttttggggtatacgagctacgcggatgccaaa
acaaaagagttgaacaaaggattggaccttaaaggaggtatcaacgttactcttcagatt
tccgttaaggatattttaaaaggcttggccaacaacactaagaaccctgtgttcaacaaa
gccttggcagatgccgacgaagcatcaaaaaatagtgacaacacctatttggaactgttt
ttcgaagcttttgacaatatcaaaggagataccaaactggcctcaccggacatttttgcc
aataaaggactgagcgatgatattaattttcaaatgtccgatgatgaggtaaaacccatc
atcagaagaaagattgatgaatccatagtttctgcgttcgaagttttgcgagagcgtatc
gatggttttggggtaacacagcccaatattcaaagagaaggtaactcgggaagaatttta
gtggaacttccaggggccaaggatattgcccgtgcccaggaattgttgtccagtacggca
cagttggaattttgggaaacctatccacagagcaaccaaagtattgcaacgtttttggtt
aatgccaacgaacgtttaaaagagattttggagccgaaaacgtctaccgaagacgaaatc
tcaaaaccggaatcggaaattgattccctgctatccgatgtagctcaagactcgttggat
atgtcacaggatgccaatccgattttgggtaaattgattccggccgatccagggagtcac
gccatagcaagagccttggtggccgataccgcagaaattggcgggtatttaagaatgcct
gcaattaaaaggctattgccgaatgatgttcagtttaccaaattcctttgggaaagacct
tcgcaagatgcggaaatagttgacttgtatgcattgaaatctaaccgagaaggtacacca
aggattagcggagatgttgtttccgatgctcaggatacctttgatcagttcaataaaccg
gccgttagcatgacgatgaatactcgtggtgccaaagaatgggaagaattaacgggggat
gcctacaacaaccaaactggtattgccattgtattggataacaaagtgtacactgcacct
ggggtttcttcggggccaatttctggtgggcgttcggagattacgggaacatttactgta
aacgagaccaaagatattgccaacgttttgcgtgcgggtaaacttcctgcttctgcggat
attatccagtcagaagtggtaggcccatctttgggtcaagaagctatcgatagtggattt
atgtcctttatgatcgccatggcgttcgttttgctttggatgatattctactacggtaga
gcaggagtgtttgcggatatcgctttggtattcaatattttgttgatttttggtgtgctg
accagccttggcgctgtattgacattgccaggtattgcgggtattgtactgactataggt
atgtcggtagatgccaacgtacttatttttgaaagggttaaagaagagttggcgcgcgga
aaaggaaaggcacaagccatagccgatggttttggaaacgctttgtcctctattttggat
gccaatattactacaggtcttactgcgatcattctttttgtttttggttcaggaccaatt
aaaggttttgccacgaccttgatgatcggtattgttacttccttgttcacggccattttt
gttactcgattaatgatcgaggcctacacgagcaaaaaaggaaggcgcctcgatttcagt
acaggtatcacaaagaacctgtttaccaatttggatatcaacttcttgtccaaacgaaag
atcgcctatgtggtatccgccattttggtagcggtgagtgttttctcgttgtttaccaat
ggacttaaccaaggggttgattttataggaggacgttcttatcagatccgttttgagaaa
gctgtgaacccttcggagattgcatccgaacttaatacggtattcggtagtggtaccaat
gtgaaaacttttggtgatgccaatcagataaaagtgaccacaccatacaaagtggatcaa
gaaggagtggagatagatacggagatccaggataagctgtacacatcgctacaaaaatat
ttgccagacggaacttcttttgaagattttaccgttggtgcttccgaaaaatctatcggt
atccttcaatctgttaaggttgggcctaccatcgcggatgatatcaagaaaaacgctttc
ttggccattatcggttccttggcggtagtattcctttatattcttttcaggtttagaaaa
tggcagttctctttaggggctgtggtagcggtattccacgatgttatgatcgttttgggt
atattctcccttacaggtagcataatgccgttcaacatggaaattgaccaagcctttatt
gcggccatcctaaccgtaattggttattccctgaacgatacggtggtagtattcgaccgt
attcgtgaagtaactggcctaaaaggctggaagggtggagagcacattaacttggcattg
aacagtacattgagccgaaccttgaacacctcgcttaccacattgatcgtgttgttggct
atctttatttttggaggcgagagcctaagaggatttatgttcgcgatgatcattggtgta
atcgtaggtacatattcatctgtatttatcgcaacaccggtgatgttcgattcattaaag
aacaaagttgctgaagcaaccgaatcgtag
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