Flagellimonas alginolytica: ABTP35_03055
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Entry
ABTP35_03055 CDS
T11189
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
faj Flagellimonas alginolytica
Pathway
faj03030
DNA replication
faj03430
Mismatch repair
faj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
faj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABTP35_03055
03430 Mismatch repair
ABTP35_03055
03440 Homologous recombination
ABTP35_03055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
faj03032
]
ABTP35_03055
03400 DNA repair and recombination proteins [BR:
faj03400
]
ABTP35_03055
Enzymes [BR:
faj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABTP35_03055
DNA replication proteins [BR:
faj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABTP35_03055
DNA repair and recombination proteins [BR:
faj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABTP35_03055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
GIY_YIG_2
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
XHB42239
LinkDB
All DBs
Position
687608..688984
Genome browser
AA seq
458 aa
AA seq
DB search
MYTIIDIETTGNGVKGNKITEISIFKYDGNQIVDEFTSLVNPQSPIPYFITGLTGIDDQM
VQNAPTFLEISENILSITEGCIFVAHSVNFDYGVIKEEFRQIGIDFTRKKLCTVRLSRKL
IPGLHSYSLGKLCSAIEIPLTDRHRARGDAHATVLLFEQLLAKPDSETVFKKFLNARSQE
ATLPPHLPKSVFDRIPQKPGIYYFMNQKGEIIYVGKAINLKKRVLGHFYDKSRKEIQMCS
ETANIDFKLAGSELVALLMESAEIKRLFPPYNRAQKRMGKQYAIFSYEDRNGITHLAFNT
IKGVPDPLKIFHNQTDCRAYLEEICKSFSLCPKYCHLQQTTSACSHHQITSCQGICKGEE
SVADYNGKVQEAIQHMKMLASEVRVIKEKGREPNENAIILIADGVYKGFGFIDTDIEISS
LEDLTAFITPQKHTVETESILTQYLLKEPTTQIFNVAT
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttgtacactataatcgacatagagacaacgggaaacggagtcaagggcaacaagatcacc
gaaatatccatttttaaatatgatggaaatcaaattgtggatgaattcacatctttggtg
aacccgcaaagccccatcccctattttattaccgggctcacgggaatcgatgatcaaatg
gtacaaaatgccccaactttccttgagatttccgaaaatatactgagtattacggagggc
tgtatttttgtggcgcactccgttaattttgattacggggtgatcaaggaagagtttcgg
cagattggtatcgattttactagaaaaaaactctgcacggtacgtttgtccagaaagttg
attccaggtctccattcgtacagtttgggcaaattatgctccgccatcgagattccattg
acggaccggcaccgtgcgcgaggagatgcacacgctacggttcttctatttgaacaactc
ttggccaaaccggattcggaaacggtgttcaaaaagtttttgaacgcccgaagccaagaa
gctacccttccgccccatttgcccaaatcggtatttgaccgtattccccagaaaccgggc
atctactattttatgaaccaaaaaggggagattatttatgtgggaaaggccattaaccta
aaaaaacgggtgttgggacatttttacgacaaaagccgaaaagaaattcaaatgtgcagc
gagacggccaacattgattttaaactcgcggggagtgaactggtagctcttttaatggaa
tccgcggagatcaaacggctattcccaccctataaccgtgcccaaaaaagaatgggaaag
cagtacgccatattctcttatgaggaccggaacggcataacacacttggctttcaacact
attaaaggggtgcccgacccattgaagatctttcataaccaaacggattgcagagcgtat
ctcgaggagatatgcaaaagcttttcgttgtgtccaaaatactgtcatctacaacagacc
acatcggcctgttcccatcatcaaattacctcatgccaaggcatttgcaagggagaagaa
tccgttgccgattataacggaaaagtgcaggaagcaatacaacacatgaaaatgctcgct
tccgaagtgagggttatcaaagaaaaaggaagagaacccaatgaaaacgccataatccta
atagccgatggtgtgtacaagggctttggatttattgatacggacattgaaatttcttct
ttagaggatctaacggcttttatcactcctcaaaaacatacggtggaaacggaaagcata
cttacacaataccttttaaaagagccgaccacccaaatatttaacgtcgccacataa
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