Flagellimonas alginolytica: ABTP35_03130
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Entry
ABTP35_03130 CDS
T11189
Name
(GenBank) helicase HerA-like domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
faj Flagellimonas alginolytica
Brite
KEGG Orthology (KO) [BR:
faj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
faj03400
]
ABTP35_03130
DNA repair and recombination proteins [BR:
faj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
ABTP35_03130
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_10
FtsK_SpoIIIE
TrwB_AAD_bind
AAA_16
ResIII
Zot
AAA_30
CbiA
AAA_19
CorA
AAA_7
Zeta_toxin
AAA_6
Hydrolase
SRP54
T2SSE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
XHB42254
LinkDB
All DBs
Position
706021..707532
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AA seq
503 aa
AA seq
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MGNKEKFFEHIAQGYAMKGDYITMGAGMLDGETITDAHIKIPLKMMNRHGLIAGATGTGK
TKTLQVLAENLSDKGIPVLLMDLKGDLSGIAQPSPGHPKIDERHEKIGLPFEPKGFPVEI
MSLSEQDGVRLRATVSEFGPVLLSRILDLTVTQEGIVAVVFKYCDDNKLPLLDLNDFKKV
LQYATGEGKKEFQSAYGRISTSSTGTILRKIIELEQQGADLFFGEKSFEVDDLVRIDENG
RGFINIIRLTDIQDRPKLFSTFMLSLLAEIYATFPEQGDSDRPELILFIDEAHLIFDNAS
KALLDQIESIVKLIRSKGIGLYFVTQNPTDVPDDVLAQLGLKVQHALRAFTAKDRKAIKL
TAQNYPISEFYDTAEVLTSLGTGEALISALDEKGRPTPLAATMMRAPMSRMDVLSDSEIK
EVLDASKLIKKYNEEIDRESAYEILSEKIEKAEKEAEKEKEIKQTSRRTTSTRRSTRMNP
VVKVLTSATFIRGVLGVLKKVIR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgggcaataaagaaaaattctttgaacatatagcacagggatacgccatgaaaggcgat
tacattaccatgggtgccggtatgttggatggtgaaaccatcaccgatgcacatataaag
attcctttaaaaatgatgaaccgtcacggactcatcgcaggtgcaacgggaaccggtaag
acgaagaccctacaagtgcttgcagagaatttatccgacaaaggaatcccggttttgctc
atggatctaaaaggagatttgagcggtatcgcccaaccaagccccggccatcctaaaatt
gatgaacggcacgaaaagatcgggcttccattcgaacccaaaggttttcctgtagagatt
atgtcactatccgaacaagatggggtacgcctgcgcgccactgtttccgaatttggccct
gtacttttatcccgtattttggatttgacagtaacccaagaaggtattgttgccgtagta
tttaaatattgtgacgataataaattacccttgctcgacctaaatgattttaaaaaggta
ctgcaatatgcaactggtgagggcaaaaaagagtttcaatcggcttatggccgtatatcc
acaagttccacagggactattttaagaaagatcatcgagctcgaacaacagggagccgat
ttgtttttcggggaaaaatcgttcgaagtggacgatttggtccgtattgatgaaaacgga
cgaggatttatcaatataatccgtttgaccgatattcaggaccgtcccaaactcttctca
acctttatgttgagccttttggcggaaatttatgccaccttcccagagcaaggcgatagc
gaccgacccgaattgatattgttcatagacgaggcacaccttatttttgacaatgccagc
aaagcgcttttagatcaaattgaaagtattgtaaaactaattcgctccaaaggaataggg
ttgtattttgtaacccaaaacccgaccgacgtgccggacgacgtactggcacaattagga
ttaaaggtgcaacatgccctacgtgcttttacggccaaggaccgaaaagccatcaagctc
acggcgcagaactatcccatttccgagttttacgacacagccgaggtacttacctcttta
ggaaccggggaagccttgatctccgctttggacgaaaaaggacgccccactccactggca
gcaaccatgatgcgtgctcctatgagtcgaatggatgtgttaagcgattccgagatcaaa
gaggttttggacgcctccaaattgataaaaaaatacaatgaggaaatcgatagggaaagt
gcttacgaaatcctgagtgaaaaaattgaaaaagctgaaaaggaggcagagaaagaaaaa
gaaataaaacaaacttcccgcagaacaacctcaacacgaagaagcaccagaatgaaccct
gtggtcaaagttttgaccagtgcaacatttatccggggggttttgggcgtattaaaaaaa
gtgattcgataa
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