Flagellimonas alginolytica: ABTP35_03930
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Entry
ABTP35_03930 CDS
T11189
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
faj Flagellimonas alginolytica
Pathway
faj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
faj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ABTP35_03930 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
faj01007
]
ABTP35_03930 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
faj03016
]
ABTP35_03930 (lysS)
Enzymes [BR:
faj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
ABTP35_03930 (lysS)
Amino acid related enzymes [BR:
faj01007
]
Aminoacyl-tRNA synthetase
Class II (A)
ABTP35_03930 (lysS)
Transfer RNA biogenesis [BR:
faj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
ABTP35_03930 (lysS)
Prokaryotic type
Other AARSs
ABTP35_03930 (lysS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
AlkZ-rel
TrmB
Motif
Other DBs
NCBI-ProteinID:
XHB42401
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All DBs
Position
872816..874507
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AA seq
563 aa
AA seq
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MQLSEQEIVRREKLTKLREMGIDPYPAALYPVDATSKSIKNDFEEGKKVVISGRLMSRRI
QGKASFAELQDSEGRIQVYFNRDEICPGDDKTLYNDVYKKLLDIGDIIGIEGELFTTQVG
EKTVMVKNFSLLSKSLRPLPLPKVDDEGKVYDAFNDPELRYRQRYVDLVVNPHVKDTFIK
RTKITTSIREFYNQKGYLEVETPILQPIPGGAAARPFLTHHNALNIPLYLRIANELYLKR
LIVGGFDGVYEFAKDFRNEGMDRTHNPEFTVMELYVAYKDYNWMMDTTEELLEKVAIDAT
GSSKVTVGDHEIEFKAPYPRVPILEAIKIHTGIDVSGMDEDELRETAKKLGIEVDDTMGI
GKLIDEIFGEKCEHHYIQPTFIIDYPKEMSPLTKEHRSNPRLTERFELMVNGKELANAYS
ELNDPIDQRERFEDQLRLSEKGDDEAMFIDQDFLRALEYGMPPTSGIGIGIDRLVMLLTN
NSSIQEVLFFPQMRPEKKQVELTEEEKIILDILKPQGQMALSDLKEKAGLSGKKWDKSTK
GLNKHGLIKIEKTEDALLVKYTG
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcaactatcggaacaagagatcgttcgaagggaaaaattgaccaaactcagggaaatg
ggcatagacccctaccccgcagctttatatcctgttgatgccacttccaaaagtattaag
aatgattttgaagaaggaaaaaaagtagtgatttccggtagattgatgtcgcgacgtatt
caaggtaaagcttcgtttgccgaacttcaggacagcgaaggtagaattcaagtgtatttt
aaccgtgacgaaatttgcccgggagatgacaaaaccctgtacaacgatgtctacaaaaaa
ttgctggacataggggacattattggaatagaaggagagcttttcaccactcaagtaggt
gaaaaaaccgtgatggtgaagaacttctcactgttgagcaaaagtttaagaccgttgccg
ctaccaaaggtagatgacgaaggtaaagtgtacgatgcctttaacgatccagagctgaga
taccgacagcgatatgtggatttggtggtaaacccacacgtaaaggacacttttataaaa
agaacaaaaataaccaccagtatccgtgagttttataaccaaaaaggatatttggaggtt
gagacacccatattgcaacccataccgggcggagctgcggcgcgtccgttcctaacacac
cacaatgcgctcaacattccactgtacctgcgcattgccaacgaactttatcttaaaagg
ttgattgttggcgggtttgacggcgtttacgaatttgccaaggatttccgcaacgaaggt
atggatcgtacccataacccggagtttaccgtaatggaactctacgtagcctacaaggac
tataattggatgatggacaccacagaagaactattggaaaaagtagctattgatgcaact
ggcagttccaaagtaacagtgggtgatcacgaaatagaatttaaggcaccctacccaagg
gttcccattttggaggccattaaaatccatacgggaattgacgtttctggaatggacgaa
gatgaacttcgagaaaccgccaaaaaattgggcattgaagtggatgacaccatgggcata
ggtaaattgatcgatgagatttttggtgaaaaatgtgaacaccactacattcagcccacg
tttattatcgattatccaaaagaaatgagccctttgacgaaagaacaccgttccaatcct
cgattgacggagcgttttgagttgatggtaaatggaaaggagttggccaatgcctattcc
gagctcaacgaccccattgatcaacgtgagcgttttgaagatcagcttagactttccgaa
aaaggagatgacgaagccatgttcatagaccaggatttcttacgcgcgctggaatacgga
atgcccccaacatcgggcatcggtatcgggatagaccgtttggtgatgctgttgacgaac
aattcgtccattcaagaagtgttgttcttcccgcaaatgcgaccagagaaaaagcaagta
gagcttaccgaagaggaaaaaatcattttggacattcttaagccacaaggtcaaatggcc
ctatccgaccttaaggaaaaagcagggctaagcggtaaaaaatgggacaagagcactaaa
ggtttgaacaagcatgggctcatcaaaatagaaaaaacggaagatgccctactcgtaaag
tatacaggatag
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