Flagellimonas alginilytica: ABTP35_05395
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Entry
ABTP35_05395 CDS
T11189
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
faj Flagellimonas alginilytica
Pathway
faj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
faj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABTP35_05395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
faj03400
]
ABTP35_05395
Enzymes [BR:
faj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ABTP35_05395
DNA repair and recombination proteins [BR:
faj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ABTP35_05395
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
XHB42687
LinkDB
All DBs
Position
complement(1223916..1224680)
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AA seq
254 aa
AA seq
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MKIVSYNVNGIRAALKKGFVEWLETVSPDVVCLQETKAMEEQLDTTVFKEAGYSHNYWFS
AQKKGYSGVALLCKEEPDHVEFGTGIDYMDHEGRNIRADYGDLSIMSMYLPSGTNMDRLD
FKLTYMDDFQKYADELRKERPNLIVLGDYNICHEAIDIHDPVRNKNVSGFLPVEREWIGN
FMKSGFIDSFRHFNKEPDNYTWWSYRANARANNKGWRLDYGMVADPLEDRLKRSVILSEA
KHSDHCPILLEVEK
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgtatcctacaatgtaaacggtattcgggcagcgcttaaaaaaggatttgtg
gaatggttggaaacggtgagccctgacgtggtttgcctgcaggagaccaaggccatggag
gagcaattggatactactgtttttaaagaggcaggatattcccataattattggttcagc
gcccaaaaaaaaggatatagtggcgtggctttactttgtaaagaggagccggaccatgtg
gaatttggtacgggtatcgactacatggatcatgaaggaagaaatatccgagccgactac
ggagacctttccataatgagcatgtacttgccatccggcaccaatatggatcgcctggat
tttaaattgacgtatatggacgattttcagaaatatgcagatgagcttcggaaagaacgt
cccaatttaattgtgttgggagactataatatttgtcatgaagctatagatattcatgat
cctgtccgaaacaaaaacgtatcgggattcttgcctgtggaacgcgaatggatcggcaat
tttatgaaaagtggctttattgacagttttaggcatttcaataaggaacccgataattac
acctggtggagttaccgcgccaatgccagggccaacaacaaaggctggcgtttggattat
ggcatggtggccgatcctttggaagatcggttaaagcgttctgtgatcttgtccgaagcc
aaacatagtgatcactgccccattttattggaggttgaaaaataa
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