KEGG   Flagellimonas alginilytica: ABTP35_05925
Entry
ABTP35_05925      CDS       T11189                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
faj  Flagellimonas alginilytica
Brite
KEGG Orthology (KO) [BR:faj00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    ABTP35_05925 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:faj03019]
    ABTP35_05925 (rnc)
   03009 Ribosome biogenesis [BR:faj03009]
    ABTP35_05925 (rnc)
   03036 Chromosome and associated proteins [BR:faj03036]
    ABTP35_05925 (rnc)
Enzymes [BR:faj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     ABTP35_05925 (rnc)
Messenger RNA biogenesis [BR:faj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ABTP35_05925 (rnc)
Ribosome biogenesis [BR:faj03009]
 Eukaryotic type
  90S particles
   RNase
    ABTP35_05925 (rnc)
 Prokaryotic type
  rRNA processing factors
   ABTP35_05925 (rnc)
Chromosome and associated proteins [BR:faj03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     ABTP35_05925 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase
Other DBs
NCBI-ProteinID: XHB42792
LinkDB
Position
complement(1342157..1342894)
AA seq 245 aa
MKLTSKIFNSHPDSDGDFFLGMKRILGFKPKNLELYKTAFLHRSMNKKDEKGNPVNYERL
EFLGDSMLGTIISKHLYNQVPEGDEGYLTKMRSKVVSRKHLNELGKDLGLLDFVESRIPK
AHFGENIHGNVFEALVGAIYLDKGYMYCEKFINERVIEPYVDIEQLEGKVISYKSLVIEW
CQKEKKTFNYHVYEDTGNDELKHFAVKLTIGDRMLAKARATSKKKAEEKASKRAYFALQS
KIENQ
NT seq 738 nt   +upstreamnt  +downstreamnt
atgaaactcacttccaaaatattcaattcccatcctgactcggatggggatttttttttg
ggtatgaaaaggatccttggtttcaagcccaaaaacttggagctctataaaacagcgttc
cttcataggtccatgaacaaaaaggacgaaaaagggaatcctgtaaactacgagcgcctc
gaatttttgggagattcaatgctggggaccatcatttcaaaacatttgtacaaccaagta
ccggaaggggacgagggatatctcaccaaaatgcgttccaaggtagtgagccgtaagcac
ctgaacgagcttggtaaagaccttggattgctggattttgtggaaagtaggattccgaaa
gcacattttggggagaatattcatggtaatgtctttgaagcacttgtgggtgcgatctac
ttggataaaggctacatgtattgtgaaaaattcataaatgaaagagtaatagagccctat
gtggatattgaacagctcgagggtaaagtgatcagctataagagtttggtgatagaatgg
tgccaaaaagaaaaaaagacattcaattatcacgtatatgaggacacaggaaacgacgag
ttaaaacattttgccgtaaaacttaccattggtgatagaatgttggcaaaagcacgggcc
acctccaagaaaaaagcagaggaaaaagcctcaaaacgagcatatttcgctctgcagagc
aagattgaaaaccagtaa

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