Flagellimonas alginolytica: ABTP35_08705
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Entry
ABTP35_08705 CDS
T11189
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
faj Flagellimonas alginolytica
Pathway
faj03030
DNA replication
faj03430
Mismatch repair
faj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
faj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABTP35_08705
03430 Mismatch repair
ABTP35_08705
03440 Homologous recombination
ABTP35_08705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
faj03032
]
ABTP35_08705
03400 DNA repair and recombination proteins [BR:
faj03400
]
ABTP35_08705
Enzymes [BR:
faj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABTP35_08705
DNA replication proteins [BR:
faj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABTP35_08705
DNA repair and recombination proteins [BR:
faj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABTP35_08705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
SMC_ScpB
Motif
Other DBs
NCBI-ProteinID:
XHB40083
LinkDB
All DBs
Position
complement(1984555..1987554)
Genome browser
AA seq
999 aa
AA seq
DB search
MYLNCHTYYSLRFGTFSEVELLQLAQQNHVTQLVLTDINNTSAGLNFVRKAPEFGVKPIL
GIDFRNGTEPCFIGIAQNNEGYLELNDFLSNHLYDGSKIPDRAPAFENVFVVYPFEQVLL
NELDHLQDHEFIGISIKDLRRLPFSKLASLTKKLVVQQPVTFRNKQDFNAHRLLRAIDNN
LLLSKLPKEEEASEEEKMYPVQNLAAAFSEFPFILENTEKLLNKCSIHFDFSKDRKPQNL
KTYLGSIEEDEQLLDQLCAEGLPYRYEEVNDSIKNRLNKELELIKKMGFVSYFLINWDIV
SEARRRGFFYVGRGSGANSIVAYLLRITDVDPMELDLYFERFINLYRANPPDFDIDFSWK
DRPAMTEYIFERFEHVALLGTYVTFKERGVIRELGKVFGLPPQEIDFLLAGRYDFDQLDH
VSKLVLKYGSLLKGKPNYLSIHAGGILISDKPLHWFSATHLPPKGFPTTQYDMVIAEDVG
LYKFDILGQRGLGKIKEALEIVAYNQPEKYDRIDIHNIKGFKKDPVINNLIKTAQCMGCF
YVESPAMRMLLKKLQVDNYLGLVAASSIIRPGVAKSGMMREYILRHRNKGRTEEKAHPVM
LEIMPDTYGVMVYQEDVIKVAHHFAGLDLGEADVLRRGMSGKFRSREEFQKVQDKFISNC
RKKGYAESLISEIWNQVASFAGYAFAKGHSASYAVESYQSLFLRAYFPLEYMVAVLNNGG
GFYRSEFYVHDARMMGATIHPPCVNKSMIVNRIYGKHIYLGMMYLRDLESRVMERILKER
MLHGSFSSLEDFLDRVFISMEQLSILIRIDAFRFTGINKHELLWKAHLMLSKNDRLEHPK
LFPPRHQKFQMPQLNTTTLETAFEQWELLGFCLCSPFELLEEPPKNTNGQKDLERYLNKY
IDIYGYLVTVKNTSTHHGKRMHFATLVDQHGEVFDTVLFPPVAAKYYFRGKGIYRFYGKV
VEEFGFLSIEVIKMKKENYVQDPRYADMRMSKKLFDSKK
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
ttgtacctcaactgccacacatattatagtttacggttcgggacgttctcggaggtggaa
ctcttgcaattggcgcaacagaaccacgtaactcaattggtgcttaccgacatcaacaat
acctcggcgggcttgaattttgttcgaaaagcaccagaatttggcgtgaaaccgattttg
gggattgattttaggaatggaaccgaaccctgctttatcggtattgcccaaaacaacgag
gggtatctggaactgaacgattttttgtccaatcatctttatgatggttccaagattcca
gatcgtgcgcctgcttttgagaatgtatttgtggtctatccatttgaacaggtattgctc
aacgaactggaccatctccaagatcacgagttcatcggaatttccattaaagatctgcgc
aggcttccgttttcgaaattggcttccctgaccaaaaaattggtggtacagcagcctgtc
acctttcggaacaaacaggatttcaacgctcacagattgctaagggccatcgacaataat
ctactattgagcaaacttccaaaggaagaagaggccagcgaagaagaaaaaatgtatccc
gtccaaaatctggccgctgcgttttcagaattcccttttattttggaaaacacggaaaaa
ctgctcaacaagtgcagcatccattttgacttttccaaggacagaaaacctcaaaacctc
aaaacctatttgggaagcattgaagaagatgaacaactcttggaccaactctgcgccgag
ggactcccctatcggtatgaagaagtgaacgattccatcaaaaaccgattgaacaaggaa
ttggaactcatcaaaaaaatgggtttcgtttcctactttttgatcaattgggatattgtt
tccgaagcaagacgaagaggtttcttttatgtaggccgtggcagtggtgcgaatagtatt
gtggcctacctccttcgcatcaccgacgtggaccctatggagcttgatttatattttgag
cgtttcattaacctctatcgagccaatcctcccgattttgacattgatttttcgtggaag
gatcgccctgccatgaccgaatacatcttcgagcgctttgaacacgtggctctgctcggt
acttatgtcacttttaaggagcggggcgtaattcgggaattaggcaaagtgttcggactt
ccaccacaggaaattgattttttactggcgggaagatatgatttcgaccaactggaccat
gtatcaaaactcgtactgaaatatggcagcttgctcaagggcaaacccaattatttgagc
attcacgcaggggggattttgatcagcgacaaacctttgcattggttttcggctactcat
ttaccgccaaagggatttcccactacccaatacgatatggtcattgccgaggatgtggga
ctctacaaatttgacatccttggtcagcggggactgggcaaaatcaaggaagcactggaa
atcgtcgcctacaaccaacctgaaaaatatgacagaatagatatccacaacatcaaaggg
tttaaaaaagaccctgtcatcaacaacttgatcaagaccgcgcaatgcatgggctgtttt
tatgtggaatcgcccgccatgcggatgttgttgaaaaaactacaggtcgataattatctg
ggattggtcgccgccagttccattatccgtcccggtgtggccaaaagcggtatgatgcgg
gaatatattttacgccatcggaataaaggacgaaccgaggaaaaggcacatcccgtgatg
ttggaaattatgcccgacacctacggggtaatggtctaccaagaagatgtgatcaaagtg
gcccatcattttgccggtctggaccttggcgaagccgatgtactccgaaggggtatgagc
ggtaagttccgctcgcgggaagagttccaaaaagtacaggacaagtttatttccaattgc
aggaaaaagggctacgcggaatccctcatctcagaaatctggaaccaagtggccagtttt
gcaggctatgcttttgccaaagggcactctgcctcctatgccgtggagagctatcaaagt
ttgtttttgagggcctattttcctttggaatatatggtggccgtgctcaataatggaggc
gggttctaccgttcggaattctacgtgcacgatgcccgaatgatgggtgcgaccattcat
ccgccctgcgtgaacaaaagtatgatcgtcaaccgcatttacggcaagcacatttacttg
ggaatgatgtacctccgcgacctggagagcagggtcatggaacgcatcctaaaagagcgg
atgctccacggaagtttttcctctttggaagatttcttggaccgagtatttatcagcatg
gagcaactttccattttgatccgtattgatgcgtttcgttttacggggatcaacaagcac
gaactgctctggaaagcccacttgatgctctccaagaacgaccgattggaacacccgaag
ctttttccgccaagacatcaaaaatttcagatgccccagctcaacaccacaacattggaa
actgcttttgaacaatgggaacttttgggcttctgtctttgcagtccttttgaattgttg
gaggagcctcccaaaaacacgaacggacaaaaagacttggaacggtacctcaacaagtac
atcgatatttatgggtatctggtcacggtaaaaaacacctccacccatcatggcaagcgc
atgcactttgccactttggtagaccagcacggcgaagtgttcgacacggtgctcttcccc
cccgtggcagccaagtactattttaggggaaagggcatttaccgattttatggcaaagtg
gtggaagaatttggtttcctgagcattgaggtcatcaaaatgaaaaaagaaaactacgta
caggaccctagatatgccgatatgagaatgagcaaaaaattatttgattcgaagaagtga
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