Flagellimonas alginolytica: ABTP35_09555
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Entry
ABTP35_09555 CDS
T11189
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
faj Flagellimonas alginolytica
Pathway
faj02020
Two-component system
faj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
faj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABTP35_09555 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ABTP35_09555 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
faj03021
]
ABTP35_09555 (rpoN)
Transcription machinery [BR:
faj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABTP35_09555 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
SPT2_N
HTH_12
CEP76_N
Motif
Other DBs
NCBI-ProteinID:
XHB40249
LinkDB
All DBs
Position
complement(2158133..2159590)
Genome browser
AA seq
485 aa
AA seq
DB search
MLKQHLQFKLSQKLSPQQIQLMKLIQLPTQAFEQRLKQELEENPALESGKEESDALDDVY
EDTYDDSADSENIDTEEINIDDYLSDDEIPDYRTQANNYSAEDDDKSVPYAAGTSFNQYL
LNQLNTVYLDDQEWAIAEFLVGSVDESGYIRRPLTDIMDDLAFTQNIYVEEEKIEQVLKI
VQDLDPPGVAARSLDECLIIQLKRKSQKPSIELATSILEKSFDHFTKKHYSKLIQKHHIT
EEQLKDAISEIEKLNPKPGGSYSGNTRMIEHIVPDFSIKIVDGELELSLNGRNAPELHVS
KDYSNMLEGYKNAKEKSKSQKDTVMFIKQKLDAAKWFIDAIKQRQQTLFVTMSTIMEYQK
EYFMTGDERKLRPMILKDIADKIDMDVSTVSRVANSKYVDTPYGTKLIKDFFSESMKNEQ
GEDVSTKEIKKILETVIRDEEKKKPLTDAKLATILKDRGYPIARRTVAKYREQLGIPVAR
LRKEI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaacaacatctacagtttaagctttcacaaaaactgtctccacagcagattcag
ctcatgaaacttattcaattgccgacccaggcatttgaacaaaggttaaagcaagagttg
gaggaaaaccctgcattggagagcggcaaggaagaatccgatgcgctggatgatgtttat
gaggatacttacgatgattccgcggatagtgaaaacattgatactgaagaaatcaacatt
gacgattacttaagtgacgatgagattcccgattaccgcacacaagccaataattatagt
gcggaagatgatgacaagagcgtgccgtatgctgcaggcacatcgttcaaccaatatttg
ctcaatcagctcaataccgtctatttagatgatcaagaatgggccattgccgagttccta
gtaggcagcgtggatgaaagtggctacattcgaaggccacttaccgatattatggacgac
cttgcctttacacagaatatttacgtagaggaagagaagatagagcaagtcctcaagatt
gtacaagacctagacccaccaggggtggcagcacgatcgttggacgaatgtttgatcatt
caactaaagcgtaaaagtcagaaaccgtccatagagctggcaacaagcattttggaaaaa
tcttttgatcattttacgaaaaagcattattccaaattgatccagaagcatcatattacc
gaagaacagctaaaagatgccatttctgaaatagaaaaactcaatcccaaaccaggtggg
tcctactcgggcaacacccggatgatcgaacatattgtcccagatttttccataaaaatt
gtggatggcgaactggaactttcgcttaacggccgaaatgccccggaactccatgtgtcc
aaagattacagcaatatgttggaaggctataaaaatgcaaaggaaaagtccaagtcccaa
aaggatacggtaatgttcatcaaacaaaagcttgatgcggcaaaatggttcatcgatgcc
ataaagcaacgtcaacagacactgtttgttaccatgagcaccataatggaatatcaaaag
gaatattttatgaccggtgatgagcgaaagctccgccccatgatccttaaggatattgcc
gataaaattgatatggatgtttctaccgtttcccgggtggccaacagcaaatatgtggat
acgccctacggcaccaaattgatcaaagatttcttttcggagtctatgaaaaatgagcag
ggagaagatgtatccaccaaagaaataaaaaagatcttggagaccgttattcgggacgag
gagaagaaaaaacctttaacagacgcgaaactagccaccattttaaaggacagggggtat
ccaattgcccggcgtaccgtggccaaatatagagaacaacttgggattcctgtggcacgg
ttaagaaaagaaatctga
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