Flagellimonas alginolytica: ABTP35_09670
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Entry
ABTP35_09670 CDS
T11189
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
faj Flagellimonas alginolytica
Pathway
faj03030
DNA replication
faj03410
Base excision repair
faj03420
Nucleotide excision repair
faj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
faj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABTP35_09670 (polA)
03410 Base excision repair
ABTP35_09670 (polA)
03420 Nucleotide excision repair
ABTP35_09670 (polA)
03440 Homologous recombination
ABTP35_09670 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
faj03032
]
ABTP35_09670 (polA)
03400 DNA repair and recombination proteins [BR:
faj03400
]
ABTP35_09670 (polA)
Enzymes [BR:
faj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABTP35_09670 (polA)
DNA replication proteins [BR:
faj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABTP35_09670 (polA)
DNA repair and recombination proteins [BR:
faj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ABTP35_09670 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABTP35_09670 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
XHB40272
LinkDB
All DBs
Position
complement(2184177..2187011)
Genome browser
AA seq
944 aa
AA seq
DB search
MSEQKRLFLLDAYALIFRGYYALIKNPRINSKGMDTSAIMGFVNSLFDVIKREQPDHLAV
AFDKGGSVERTELFEDYKANRDETPDAIRIAVPYIQQILQAMKIPVVELEGYEADDLIGT
LAKQAEKENYKVFMVTPDKDFGQLVSENIFMYRPARMGNGIEIWGIPEVQKRFGVKRPEQ
VIDYLGMMGDASDNIPGLPGVGDKTAKKFLEQFDSMEGLLANTDQLKGKMKEKVEENAEL
GRLSRKLAEIKVDCDVQFHAEDYEMCPPDAEKVQEIFEELEFRRLKDQFIKLFTEEAEAS
SPATSTKTAKQEANVAGSGQFTLFGGDPSEAAATLKDVNSRKNIGDVSHFYQNVQSGLGL
DLFLEMLMKQPSVCFDTETTSLNPLEAELVGIAFSWSPGKGFYVPFPDNENDARPMIEKL
RPFFESENIEKVGQNLKYDIKVMQNYGVEVKGKLFDTMLAHYLINPDMRHNMDVLAETYL
NYTPISITELIGKKGKNQLSMRDVPLEKQTEYAVEDADITFQLGLKFTPELKEAHTDKLF
DEIEIPLLRVLADMELEGINLDKDYLNGLSEQLDKDIKTLEQKIYKEAGEEFNIASPKQL
GEILFGKLKLVDKPKKTKTGQFSTSEDVLSYLAKDHEIIQNVLDYRGLAKLKSTYVDALP
NEVQQKTGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQVRKAFVPKDENYVLLAA
DYSQIELRIIAALSEEDTMISAFINGEDIHASTASKVFNVPIEEVTREQRSNAKTVNFGI
IYGVSAFGLSNQTDLSRTEAKELIDTYYKTYPKLRNYISEQIDFAREHGYVQTVLGRRRY
LKDINAGNQVVRGAAERNAVNAPIQGSAADIIKIAMINIHKKLSEGKYKTKMLLQVHDEL
VFDCYKPELEEMKELIKSEMEHAYELSVPLDVEVGIGENWLEAH
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacaaaaacgactgtttcttttagatgcctacgcacttatttttcgaggctat
tacgccctaataaaaaacccacgaatcaactccaagggaatggatacctcagcgatcatg
gggtttgtaaattctctttttgatgtgatcaaacgggaacagcccgaccatttggccgtg
gccttcgataagggaggtagcgtggaacgtaccgaattgttcgaagactacaaagccaac
cgggacgaaacacccgatgccatccgaatcgccgtgccctatatccaacaaattctgcaa
gccatgaagattcccgtggtagaactggaaggctacgaggcagatgaccttatcggcact
ttggccaagcaggccgaaaaagaaaattacaaagtatttatggttacgcccgacaaggat
tttgggcaattggtgagcgaaaatatttttatgtaccgtccggcccggatgggcaacggt
atcgaaatttggggaatcccagaggtacaaaaacgcttcggggtcaagcgtcccgagcaa
gtaatcgattatttgggcatgatgggcgatgccagtgacaatatcccgggattacctggt
gtgggcgacaaaacggccaaaaaattcttggaacaattcgattccatggaaggtctattg
gccaacaccgaccagctcaagggcaaaatgaaagaaaaagtggaggaaaatgccgaattg
ggacgtttatcccgaaaattggcagagatcaaggtcgactgtgacgtgcagttccatgcc
gaggattatgaaatgtgccccccagatgcagaaaaggtgcaagaaatattcgaagaactt
gaattccgcaggctaaaggaccaattcatcaaactatttacggaagaagcagaagccagc
tccccggcaaccagcactaaaacagccaagcaagaggccaatgttgccggtagtggacag
tttacgctctttggcggcgatccctcggaagccgcggcgaccctaaaggatgtaaacagc
agaaaaaacatcggcgatgtatctcacttttatcaaaatgtacaaagcggattgggcttg
gacctatttttagaaatgctaatgaagcaaccttccgtctgttttgatacagagaccacc
tccctcaaccctttggaggctgaactggtgggcatagcttttagctggtccccaggcaag
ggtttttatgttccctttcccgataatgagaacgatgcccgacctatgatcgaaaaacta
cgtccgttttttgaatcggaaaacatagaaaaggtggggcaaaatctcaagtacgatatc
aaggtaatgcaaaactatggcgtggaggtcaagggcaagttgttcgataccatgttggcc
cactaccttatcaaccccgatatgcgccacaatatggacgtactggcagaaacttacctc
aactacacacctatttccataaccgaacttattggtaaaaagggcaagaaccaactcagt
atgcgcgatgttcctttggaaaagcaaacggaatatgccgtggaagatgccgacatcacc
tttcagttgggattaaaatttactccagagctcaaagaagcacataccgataaattgttc
gatgaaatagagattcctttgctacgagtattggcagatatggaactggaaggcatcaat
ctggataaagattatttgaacggcctttcggagcaattggacaaggacatcaaaacactg
gaacagaaaatttataaagaagctggcgaagaattcaatattgcctccccaaaacagttg
ggagaaattctttttggcaagttaaagttggtggataaaccaaaaaagaccaaaacaggt
caattttccacttcggaagatgtactttcttatttggccaaggaccatgaaatcatccaa
aatgtcctggactaccgcggattggcaaaactaaaaagcacctatgtggatgcgctgccc
aacgaagtccagcaaaaaacgggtcgggtgcataccgattatatgcaaacggtggccgca
acgggccgtttgagcagtaacaatccgaacttgcaaaacattcccattcgcacagaaaga
ggccgacaagtacgaaaagcttttgtccctaaggatgaaaactatgttttgttggcagcg
gattactcccaaatagaattgcgcattattgcagcattgagcgaggaggacaccatgatc
tctgcctttataaatggggaggacatccacgcatccacggcatccaaggtatttaatgtg
cccattgaggaagtgacccgcgaacagcgtagcaatgccaaaacggtgaactttggaatc
atttacggggtttccgccttcggattgagcaaccaaaccgatttgagccgtaccgaggcc
aaagaactgatcgacacctattacaagacctatcccaaattgcgcaattacatcagcgag
cagattgattttgcgcgagagcatgggtacgtgcaaaccgtattgggccgacgtcgctat
ttaaaggatattaatgcaggcaaccaagtggtgcgcggggcagcggaacgtaacgccgtg
aacgctcccatccaaggaagtgcagcggatattattaagattgcaatgatcaacatccat
aaaaagctttccgaaggaaaatacaaaaccaagatgttgttacaggtgcatgatgaattg
gtgttcgattgttacaaacctgagttggaggaaatgaaagaactcattaaatccgaaatg
gaacacgcctacgaactatccgtacccttggatgtggaagtaggcattggcgagaattgg
ttggaggcgcattga
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