Flagellimonas alginolytica: ABTP35_10770
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Entry
ABTP35_10770 CDS
T11189
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
faj Flagellimonas alginolytica
Pathway
faj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
faj00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ABTP35_10770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
faj03021
]
ABTP35_10770
Transcription machinery [BR:
faj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABTP35_10770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
DUF7645
DUF6285
Motif
Other DBs
NCBI-ProteinID:
XHB40483
LinkDB
All DBs
Position
complement(2431925..2432788)
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AA seq
287 aa
AA seq
DB search
MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQRIKAGDQVALEKLTKANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKTFAFLEQAHERPPSAEEIAKELDMTVEDVKQSLKNSGRHV
SMDAPLIDGEDSNLYDVLRSGESPNPDKELLHDSLRTEIERALETLTPREADVIRLYFGL
AGQHSMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSKILKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacagttaaagattacaaaacaggttaccaatagggaaaccgcatcgttggacaag
tatctacaagaaatcggtaaggttgatttgatcaccgccgatgaagaagtagagttggca
caacgcattaaagccggcgaccaggtagccttggaaaaattaactaaagccaacctaagg
ttcgtggtatcggttgcaaagcaataccaaaaccaagggttaacactgcccgatttgatc
aatgaaggtaatttgggacttatcaaagcagcgcaacgttttgatgaaacccgtggattt
aaatttatttcatacgctgtttggtggatccgccaatccattttgcaagctttggcagaa
caatcacgtattgttcgtttgccattgaacaagatcggctccatcaataagataaataaa
acttttgctttcttggagcaagcgcacgagcgtccaccatctgctgaggaaattgccaaa
gaattggacatgaccgtggaagatgtgaaacaatccttaaagaactcaggccgtcatgta
tccatggatgcgcctttgatcgatggcgaggattccaacctttacgatgtgttgcgtagt
ggcgaatctccaaaccctgataaggaacttttgcacgattcgttacgtaccgaaattgaa
cgtgccctggaaacccttactcctcgagaagctgatgtaataagactttactttggattg
gccggccaacattccatgacgttggaagaaatcggagaaacttttgatttgacccgtgag
cgagttcgtcaaattaaagaaaaggcgattagaaggttgaagcacacgtcaagaagtaag
attttaaagacatatttggggtaa
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